RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 EIF2S1P05198 315 aaKnown RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 NUDT17P0C025 328 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 EIF2B2P49770 351 aaKnown RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 DPYSL3Q14195 570 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 C16orf72Q14CZ0 275 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 RIPOR1Q6ZS17 1223 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 BRSK2Q8IWQ3 736 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 OPTNQ96CV9 577 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 UBXN6Q9BZV1 441 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 NMRK2Q9NPI5 230 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 C1orf232A0A0U1RR37 186 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 MICAL2O94851 1124 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 BCL10O95999 233 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 CYP3A4P08684 503 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 BMP6P22004 513 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 NDST1P52848 882 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 CDC16Q13042 620 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 LRRC55Q6ZSA7 311 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 KCNK18Q7Z418 384 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 ZCCHC7Q8N3Z6 543 aaKnown RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 ZNF398Q8TD17 642 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 FBXO32Q969P5 355 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 C19orf60Q96EN9 201 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 ASB7Q9H672 318 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 PRDM16Q9HAZ2 1276 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 UTP6Q9NYH9 597 aaKnown RBP14.27□□□□□ -0.12
VTI1B-204ENST00000554659 NDUFAF1Q9Y375 327 aa14.27□□□□□ -0.12
VTI1B-204ENST00000554659 MRASO14807 208 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 CYP1A2P05177 515 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 RPA3P35244 121 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 NUP62P37198 522 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 MMP14P50281 582 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 MIEF2Q96C03 454 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 KLRC4O43908 158 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 ZNF682O95780 498 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 ASS1P00966 412 aaKnown RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 TSHRP16473 764 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 GCLCP48506 637 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 MAD2L1Q13257 205 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 USP39Q53GS9 565 aaKnown RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 FAM45BPQ6NSW5 357 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 POU5F2Q8N7G0 328 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 ST13P5Q8NFI4 369 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 SPRTNQ9H040 489 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-204ENST00000554659 MROH8Q9H579 483 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 CYLDQ9NQC7 956 aa14.27□□□□□ -0.13
VTI1B-204ENST00000554659 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 VPS4BO75351 444 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 VTNP04004 478 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 PSMB9P28065 219 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 ST13P50502 369 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SOX10P56693 466 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SLC20A2Q08357 652 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 VAC14Q08AM6 782 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 CCL15Q16663 113 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 MIB1Q86YT6 1006 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 DCUN1D5Q9BTE7 237 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 COLEC11Q9BWP8 271 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 NT5MQ9NPB1 228 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 DDX18Q9NVP1 670 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 RBM22Q9NW64 420 aaKnown RBP eCLIP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 H7C4K7 107 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 CLOCKO15516 846 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 PGS1Q32NB8 556 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 GNASQ5JWF2 1037 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SAMD4BQ5PRF9 694 aaKnown RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SCARA3Q6AZY7 606 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 PTAR1Q7Z6K3 402 aaPredicted RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 CYP4Z1Q86W10 505 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SNX32Q86XE0 403 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 ADGRE3Q9BY15 652 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 VTA1Q9NP79 307 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 KRCC1Q9NPI7 259 aaPredicted RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 A0A0U1RQJ8 604 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 UBXN8O00124 270 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 LDLRP01130 860 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SHBGP04278 402 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 CHI3L1P36222 383 aaPredicted RBP14.26□□□□□ -0.13
VTI1B-204ENST00000554659 TALDO1P37837 337 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 POU6F1Q14863 301 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 NR6A1Q15406 480 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 MAPK11Q15759 364 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 KCTD21Q4G0X4 260 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 LRRC38Q5VT99 294 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 ZSWIM2Q8NEG5 633 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 SLC25A23Q9BV35 468 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 NMRAL1Q9HBL8 299 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 UBP1Q9NZI7 540 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 A0A087WZ62 844 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 CHADO15335 359 aa14.26□□□□□ -0.13
VTI1B-204ENST00000554659 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms