RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MFN1Q8IWA4 741 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ARHGAP12Q8IWW6 846 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 LMNTD2Q8IXW0 634 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 C10orf67Q8IYJ2 551 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ANKFN1Q8N957 763 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 RFWD2Q8NHY2 731 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF566Q969W8 418 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZUFSPQ96AP4 578 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 FEM1CQ96JP0 617 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PRICKLE1Q96MT3 831 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 BIRC8Q96P09 236 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TRIB3Q96RU7 358 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 RBBP8Q99708 897 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TDRD1Q9BXT4 1180 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PPP1R12CQ9BZL4 782 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 DRC3Q9H069 523 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GABARAPL1Q9H0R8 117 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GBA3Q9H227 469 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MUC13Q9H3R2 512 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SUCOQ9UBS9 1254 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CIDEBQ9UHD4 219 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SOX13Q9UN79 622 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 LRCH1Q9Y2L9 728 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SFI1A8K8P3 1242 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 AGAP14A8MT82 685 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 H7C0S8 307 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TLR3O15455 904 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ANP32DO95626 131 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 AP2A1O95782 977 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF865P0CJ78 1059 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 BRAFP15056 766 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TNNT3P45378 269 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CTCFP49711 727 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 LIMK2P53671 638 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PLTPP55058 493 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 OTUD4Q01804 1114 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CYP4A11Q02928 519 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GAD2Q05329 585 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SLC34A1Q06495 639 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SULT2A1Q06520 285 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MTA1Q13330 715 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MTMR2Q13614 643 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GNPTABQ3T906 1256 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ACSBG2Q5FVE4 666 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 XKR7Q5GH72 579 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TREML2Q5T2D2 321 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZYG11AQ6WRX3 759 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PRPF39Q86UA1 669 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ERICH1Q86X53 443 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KIAA0825Q8IV33 1275 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 AHI1Q8N157 1196 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC63Q8NA47 563 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 C2CD4AQ8NCU7 369 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SMG8Q8ND04 991 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PHC3Q8NDX5 983 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF483Q8TF39 744 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 UBTD2Q8WUN7 234 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SGF29Q96ES7 293 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 NSL1Q96IY1 281 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CYTH2Q99418 400 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 BCL7BQ9BQE9 202 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SMARCAD1Q9H4L7 1026 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ACP6Q9NPH0 428 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CHST12Q9NRB3 414 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 OLAHQ9NV23 265 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ARL8BQ9NVJ2 186 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 FGFR1OP2Q9NVK5 253 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 THAP1Q9NVV9 213 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SAMD15Q9P1V8 674 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CTTNBP2NLQ9P2B4 639 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM181Q9P2C4 612 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 HMGXB4Q9UGU5 601 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 USP18Q9UMW8 372 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SAMM50Q9Y512 469 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CEP83Q9Y592 693 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PCDHGB1Q9Y5G3 927 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PTCH2Q9Y6C5 1203 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 A0A0A0MRY4 1105 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 LOC285095A0A1B0GVY8 99 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 FAM196BA6NMK8 535 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CXorf49A8MYA2 514 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC22O60826 627 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CPNE6O95741 557 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NPPAP01160 153 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 POU2F2P09086 479 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CSH1P0DML2 217 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CSH2P0DML3 217 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 GRK2P25098 689 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PHBP35232 272 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NSFP46459 744 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 EMP3P54852 163 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SNAP25P60880 206 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TEKQ02763 1124 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 LRP8Q14114 963 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 KYNUQ16719 465 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SETMARQ53H47 684 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 C9orf57Q5W0N0 161 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 KCTD16Q68DU8 428 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 OGFOD2Q6N063 350 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CDKL3Q8IVW4 592 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms