RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TYW5A2RUC4 315 aaKnown RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 WASH3PC4AMC7 463 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 AP5Z1O43299 807 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 GDF9O60383 454 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 TBL1XO60907 577 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 APOEP02649 317 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 TPM2P07951 284 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 BCKDHBP21953 392 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 HLA-FP30511 346 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 IL12RB1P42701 662 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 MTA1Q13330 715 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 ZNF234Q14588 700 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 SF3A2Q15428 464 aaKnown RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 CCDC6Q16204 474 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 HSP90AA4PQ58FG1 418 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 FAM133BQ5BKY9 247 aaKnown RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 KLHDC7AQ5VTJ3 777 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 SYPL2Q5VXT5 272 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 KIAA1211LQ6NV74 962 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 DPY19L2P1Q6NXN4 242 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 ZDHHC17Q8IUH5 632 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 CCDC117Q8IWD4 279 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 AHI1Q8N157 1196 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 ATP6V0D2Q8N8Y2 350 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 HJURPQ8NCD3 748 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 RLN3Q8WXF3 142 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 DDX1Q92499 740 aaKnown RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 CIPCQ9C0C6 399 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 PRDM16Q9HAZ2 1276 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 CALCOCO1Q9P1Z2 691 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 MBD1Q9UIS9 605 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-213ENST00000554508 PLA2G4CQ9UP65 541 aa9.06□□□□□ -0.96
ACTN1-213ENST00000554508 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 ASCC3Q8N3C0 2202 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SPTBN2O15020 2390 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 IGHV1OR15-9A0A0B4J2B8 117 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 GOLGA6L7A0A1B0GV03 622 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 KHNYNO15037 678 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SYNCRIPO60506 623 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 HSF2BPO75031 334 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 IGLV3-25P01717 112 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 ATP5BP06576 529 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SLC2A3P11169 496 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 PABPC1P11940 636 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 UCHL3P15374 230 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 POLR2EP19388 210 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 NDUFV2P19404 249 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 OXTRP30559 389 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SLC6A4P31645 630 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 HOXD12P35452 270 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 CDK17Q00537 523 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 RPL6Q02878 288 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 EIF4EBP2Q13542 120 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 DRAP1Q14919 205 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 DCAF6Q58WW2 860 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 MS4A13Q5J8X5 152 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 CDKAL1Q5VV42 579 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 TMEM215Q68D42 235 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 NADSYN1Q6IA69 706 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 OR6B2Q6IFH4 312 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 RFWD3Q6PCD5 774 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 CHST9Q7L1S5 443 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 TAC4Q86UU9 113 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 ADIPOR2Q86V24 386 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SLC47A2Q86VL8 602 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SYT12Q8IV01 421 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 PASD1Q8IV76 773 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 TMEFF1Q8IYR6 380 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 DEFB106AQ8N104 65 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 FRMD1Q8N878 549 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 C1orf131Q8NDD1 294 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 FIBINQ8TAL6 211 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 PIGKQ92643 395 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 BTN2A3PQ96KV6 586 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 MRGPRX1Q96LB2 322 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SLC2A13Q96QE2 648 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 CPXM1Q96SM3 734 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 NAA15Q9BXJ9 866 aaKnown RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 STK33Q9BYT3 514 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 PDCL3Q9H2J4 239 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SYNCQ9H7C4 482 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 FBRSQ9HAH7 460 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 PLCB1Q9NQ66 1216 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 ITM2CQ9NQX7 267 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 ABCB8Q9NUT2 735 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 TMEM51Q9NW97 253 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 RRN3Q9NYV6 651 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 SUN2Q9UH99 717 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 EVLQ9UI08 416 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 GGA2Q9UJY4 613 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 AJAP1Q9UKB5 411 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-213ENST00000554508 DAAM1Q9Y4D1 1078 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 RAD54BQ9Y620 910 aa9.05□□□□□ -0.96
ACTN1-213ENST00000554508 CACNA1EQ15878 2313 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms