RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 EMCNQ9ULC0 261 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 PLA2G4CQ9UP65 541 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 PLLPQ9Y342 182 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 WDR27A2RRH5 827 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 NFKBIEO00221 500 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 KRT38O76015 456 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 AMHP03971 560 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 ZFXP17010 805 aaPredicted RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 CDH5P33151 784 aaPredicted RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 DLG2Q15700 870 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 TAZQ16635 292 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 ZNF618Q5T7W0 954 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 PPP1R26Q5T8A7 1209 aaPredicted RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 ULK2Q8IYT8 1036 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPTB-206ENST00000553938 SNRNP25Q9BV90 132 aaKnown RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 MRPL4Q9BYD3 311 aaKnown RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 CLIC5Q9NZA1 410 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 PCDHGC3Q9UN70 934 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 XIRP2A4UGR9 3374 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 TM9SF1O15321 606 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 RNASEH1O60930 286 aaKnown RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 OCRLQ01968 901 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 CFAP157Q5JU67 520 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 PAOXQ6QHF9 649 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 PHTF2Q8N3S3 785 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 TMCO5AQ8N6Q1 288 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 RDM1Q8NG50 284 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 CFAP61Q8NHU2 1237 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 LRCH1Q9Y2L9 728 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 SPTLC1O15269 473 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
SPTB-206ENST00000553938 VHLP40337 213 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 PSMD7P51665 324 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 SLC18A1P54219 525 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 ADARP55265 1226 aaKnown RBP12.48□□□□□ -0.41
SPTB-206ENST00000553938 ZNF667Q5HYK9 610 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 GRAMD4Q6IC98 578 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 SPATA24Q86W54 205 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 ANKRD27Q96NW4 1050 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
SPTB-206ENST00000553938 OR6B1O95007 311 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 ALDOAP04075 364 aaKnown RBP12.48□□□□□ -0.41
SPTB-206ENST00000553938 PTPN7P35236 360 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 NUMBP49757 651 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 CCR3P51677 355 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 HDAC4P56524 1084 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
SPTB-206ENST00000553938 SLC34A1Q06495 639 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 KRT81Q14533 505 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 FKBP1CQ5VVH2 108 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 CASC4Q6P4E1 433 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 NUDCD3Q8IVD9 361 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 CCDC185Q8N715 623 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 E2F7Q96AV8 911 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 RNF157Q96PX1 679 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 MRPL45Q9BRJ2 306 aaKnown RBP12.48□□□□□ -0.41
SPTB-206ENST00000553938 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 SPO11Q9Y5K1 396 aa12.48□□□□□ -0.41
SPTB-206ENST00000553938 A0A087WZ62 844 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 CILPO75339 1184 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 ATP5HO75947 161 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 PRKCGP05129 697 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 KRT7P08729 469 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 SKIP12755 728 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 VAV1P15498 845 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 SKIV2LQ15477 1246 aaKnown RBP12.47□□□□□ -0.41
SPTB-206ENST00000553938 HADHQ16836 314 aaKnown RBP12.47□□□□□ -0.41
SPTB-206ENST00000553938 SLC26A11Q86WA9 606 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.47□□□□□ -0.41
SPTB-206ENST00000553938 FDXACB1Q9BRP7 624 aaPredicted RBP12.47□□□□□ -0.41
SPTB-206ENST00000553938 CAB39LQ9H9S4 337 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 PTPRHQ9HD43 1115 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 HBS1LQ9Y450 684 aaKnown RBP12.47□□□□□ -0.41
SPTB-206ENST00000553938 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 STAG3L1P0CL83 205 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 GK3PQ14409 553 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 CEP70Q8NHQ1 597 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 DEPDC1BQ8WUY9 529 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 NIFKQ9BYG3 293 aaKnown RBP12.47□□□□□ -0.41
SPTB-206ENST00000553938 FOXP3Q9BZS1 431 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 SAR1AQ9NR31 198 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 DNAJC16Q9Y2G8 782 aa12.47□□□□□ -0.41
SPTB-206ENST00000553938 IQANK1A0A1B0GTG1 560 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms