RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 DOPEY2Q9Y3R5 2298 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 LRRC72A6NJI9 287 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 SIGLEC6O43699 453 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 HMBSP08397 361 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 GP1BBP13224 206 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 CCDC130P13994 396 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 LONP1P36776 959 aaKnown RBP14.46□□□□□ -0.09
PRPF39-204ENST00000553605 MYL6P60660 151 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 KCNJ12Q14500 433 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 GPRIN1Q7Z2K8 1008 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 DENND1CQ8IV53 801 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 CPXM2Q8N436 756 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 SLC2A14Q8TDB8 520 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 DNAJC19Q96DA6 116 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 SERAC1Q96JX3 654 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 FGFBP2Q9BYJ0 223 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 PABPC3Q9H361 631 aaKnown RBP14.46□□□□□ -0.09
PRPF39-204ENST00000553605 SMYD3Q9H7B4 428 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 KIAA1586Q9HCI6 787 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 SUN2Q9UH99 717 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 NAGPAQ9UK23 515 aa14.46□□□□□ -0.09
PRPF39-204ENST00000553605 ARID1BQ8NFD5 2236 aaPredicted RBP14.46□□□□□ -0.1
PRPF39-204ENST00000553605 TRIM38O00635 465 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 OPA1O60313 960 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 CSO75390 466 aaKnown RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 HLA-FP30511 346 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 ATICP31939 592 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 DAB2P98082 770 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 NFKB2Q00653 900 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 PDE4CQ08493 712 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 SFSWAPQ12872 951 aaKnown RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 ZNF211Q13398 564 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 CHST9Q7L1S5 443 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 SPATS2Q86XZ4 545 aaKnown RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 ZNF276Q8N554 614 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 RDH13Q8NBN7 331 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 OR2T34Q8NGX1 318 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 WFIKKN2Q8TEU8 576 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 SYAP1Q96A49 352 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 CCDC97Q96F63 343 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 GZF1Q9H116 711 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 XYLT2Q9H1B5 865 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 RSPH9Q9H1X1 276 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-204ENST00000553605 NEUROG2Q9H2A3 272 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 HSPBP1Q9NZL4 362 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 SERGEFQ9UGK8 458 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 RASAL2Q9UJF2 1139 aa14.45□□□□□ -0.1
PRPF39-204ENST00000553605 HHLA1C9JL84 531 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 SUV39H1O43463 412 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 SDC3O75056 442 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 AFPP02771 609 aaKnown RBP14.44□□□□□ -0.1
PRPF39-204ENST00000553605 RALAP11233 206 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 IDEP14735 1019 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 PSEN1P49768 467 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 CCR5P51681 352 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 MPPE1Q53F39 396 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 SGO2Q562F6 1265 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 XKR5Q6UX68 686 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 SCD5Q86SK9 330 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 ADIPOR2Q86V24 386 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 ZNF516Q92618 1163 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 JAKMIP2Q96AA8 810 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 CCDC127Q96BQ5 260 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 CGRRF1Q99675 332 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 STARD5Q9NSY2 213 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 PCDHA5Q9Y5H7 936 aa14.44□□□□□ -0.1
PRPF39-204ENST00000553605 A0A1W2PP55 124 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 RNASEH1O60930 286 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 RNASEH2AO75792 299 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 ATP5BP06576 529 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 DLDP09622 509 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 FAM200BP0CF97 657 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 MYF5P13349 255 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 HOXD9P28356 352 aaPredicted RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 RBMS1P29558 406 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 ASIC1P78348 528 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 SKOR1P84550 965 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 EFEMP1Q12805 493 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 UBAP2LQ14157 1087 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 SNRNP35Q16560 246 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 BMT2Q1RMZ1 405 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 ARL13BQ3SXY8 428 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 LINC00303Q3SY05 128 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 HS1BP3Q53T59 392 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 IGF2-ASQ6U949 168 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 SV2BQ7L1I2 683 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 AHI1Q8N157 1196 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 CRYBG2Q8N1P7 616 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 C12orf29Q8N999 325 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 MFSD2AQ8NA29 543 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 CDK5RAP1Q96SZ6 601 aaKnown RBP14.43□□□□□ -0.1
PRPF39-204ENST00000553605 OMDQ99983 421 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 SDCBP2Q9H190 292 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 MTG2Q9H4K7 406 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 ABCB8Q9NUT2 735 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 CLIC5Q9NZA1 410 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 STK17AQ9UEE5 414 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 SEPT3Q9UH03 358 aa14.43□□□□□ -0.1
PRPF39-204ENST00000553605 C10orf142B7Z368 130 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms