RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	CNOT10	Q9H9A5	744 aa	Known RBP	10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	EIF2B3	Q9NR50	452 aa	Known RBP	10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	TMPRSS4	Q9NRS4	437 aa		10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	FNIP2	Q9P278	1114 aa		10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	XPO7	Q9UIA9	1087 aa	Known RBP	10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	NOVA2	Q9UNW9	492 aa	Known RBP	10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	ACTL7B	Q9Y614	415 aa		10.63	□□□□□ -0.71
DDX23-215	ENST00000552555	CLUH	O75153	1309 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555		A0A1W2PQH9	124 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	WASH4P	A8MWX3	477 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	RGS16	O15492	202 aa	Predicted RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MTSS1	O43312	755 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	CDH16	O75309	829 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	SPAG6	O75602	509 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	LRIG2	O94898	1065 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TIMP1	P01033	207 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MLN	P12872	115 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MX2	P20592	715 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	CCR1	P32246	355 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	FDFT1	P37268	417 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MDH1	P40925	334 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MMP13	P45452	471 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	PGF	P49763	221 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	IRAK1	P51617	712 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	NRL	P54845	237 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	GPX6	P59796	221 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TPI1	P60174	286 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MAGOH	P61326	146 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	RPL10A	P62906	217 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	PPID	Q08752	370 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	WASHC5	Q12768	1159 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	PDIA2	Q13087	525 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MTA1	Q13330	715 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	FASTKD3	Q14CZ7	662 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	USP41	Q3LFD5	358 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MSS51	Q4VC12	460 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	CCDC38	Q502W7	563 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	SNX30	Q5VWJ9	437 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	HEATR6	Q6AI08	1181 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TAS1R1	Q7RTX1	841 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	SCN4B	Q8IWT1	228 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	PDIK1L	Q8N165	341 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	LZTR1	Q8N653	840 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	ATP11C	Q8NB49	1132 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	ATAD1	Q8NBU5	361 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	ADAM32	Q8TC27	787 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	EPS8L3	Q8TE67	593 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	DIS3L	Q8TF46	1054 aa	Known RBP	10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	CASP10	Q92851	521 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	ZBTB9	Q96C00	473 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	IGSF21	Q96ID5	467 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	C9orf72	Q96LT7	481 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TSGA13	Q96PP4	275 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	DHRS4	Q9BTZ2	278 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	VN1R3	Q9BXE9	311 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	CAPS2	Q9BXY5	557 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	PPP1R12C	Q9BZL4	782 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	PRDM12	Q9H4Q4	367 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	C11orf49	Q9H6J7	331 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	ETNK1	Q9HBU6	452 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	RAB6B	Q9NRW1	208 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TMEM39A	Q9NV64	488 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	OSER1	Q9NX31	292 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	IGSF9	Q9P2J2	1179 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	HCST	Q9UBK5	93 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	OR12D3	Q9UGF7	316 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	SLC24A2	Q9UI40	661 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TLR6	Q9Y2C9	796 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	MFHAS1	Q9Y4C4	1052 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	TEX264	Q9Y6I9	313 aa		10.62	□□□□□ -0.71
DDX23-215	ENST00000552555	CENPF	P49454	3210 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	FGF10	O15520	208 aa	Predicted RBP	10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	CREB3	O43889	395 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	METTL18	O95568	372 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	MYC	P01106	439 aa	Predicted RBP	10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	IGLV3-27	P01718	113 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	GSTA2	P09210	222 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	SLC2A3	P11169	496 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	YWHAQ	P27348	245 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	GCA	P28676	217 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	ATP5D	P30049	168 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	SERPINB6	P35237	376 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	LMAN1	P49257	510 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	ALDH7A1	P49419	539 aa	Known RBP	10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	MLLT6	P55198	1093 aa	Predicted RBP	10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	USP46	P62068	366 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	BASP1	P80723	227 aa	Known RBP	10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	GAD2	Q05329	585 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	DMTN	Q08495	405 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	DDR2	Q16832	855 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	PARP6	Q2NL67	630 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	ANKRD20A2	Q5SQ80	823 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	ANKRD20A1	Q5TYW2	823 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	ANKRD20A3	Q5VUR7	823 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	AFMID	Q63HM1	303 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	RNF19B	Q6ZMZ0	732 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	DENND5B	Q6ZUT9	1274 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	CYS1	Q717R9	158 aa		10.61	□□□□□ -0.71
DDX23-215	ENST00000552555	ZNF534	Q76KX8	674 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms