RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 RASA4BC9J798 803 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 RNF103O00237 685 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 DNM1LO00429 736 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 EBAG9O00559 213 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ENPP3O14638 875 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 PPP1R12AO14974 1030 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SYN3O14994 580 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 RASA4O43374 803 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 AVILO75366 819 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 OAZ2O95190 189 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 APRTP07741 180 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 GRIK1P39086 918 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 PGFP49763 221 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ZNF135P52742 658 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 GEMIN4P57678 1058 aaKnown RBP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 YWHAGP61981 247 aaKnown RBP eCLIP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 WASHC5Q12768 1159 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 LRRC14Q15048 493 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ARHGEF6Q15052 776 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 PDK1Q15118 436 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SLC39A12Q504Y0 691 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ARHGEF18Q6ZSZ5 1173 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 C3orf62Q6ZUJ4 267 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 DENND5BQ6ZUT9 1274 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SCD5Q86SK9 330 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SRLQ86TD4 932 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 LRRC34Q8IZ02 419 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 DCP1BQ8IZD4 617 aaKnown RBP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 MGARPQ8TDB4 240 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 MZB1Q8WU39 189 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 CFAP36Q96G28 342 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SIGLEC10Q96LC7 697 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 CASD1Q96PB1 797 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 FAM193BQ96PV7 902 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-208ENST00000551338 TRIM62Q9BVG3 475 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 TKTL2Q9H0I9 626 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 TRABDQ9H4I3 376 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 NMUR1Q9HB89 426 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 KCNK9Q9NPC2 374 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 MARCH5Q9NX47 278 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 SAGE1Q9NXZ1 904 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 HCSTQ9UBK5 93 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 NEU3Q9UQ49 428 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 TRIM17Q9Y577 477 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 OBSL1O75147 1896 aa11.87□□□□□ -0.51
RAB5C-208ENST00000551338 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 TCRBV9S1A1TA0A576 114 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 OPHN1O60890 802 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 SPAG6O75602 509 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 LRIG2O94898 1065 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 IFNAR2P48551 515 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 SLC11A1P49279 550 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 GPR15P49685 360 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 PPIDQ08752 370 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 AP1B1Q10567 949 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ARTNQ5T4W7 220 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 BTBD8Q5XKL5 378 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 SCN4BQ8IWT1 228 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ZNF567Q8N184 647 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 MPP5Q8N3R9 675 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 CKAP2Q8WWK9 683 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 LRRC39Q96DD0 335 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 MRRFQ96E11 262 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 P2RY11Q96G91 374 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 EPAS1Q99814 870 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 SMOC2Q9H3U7 446 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 EIF2B3Q9NR50 452 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ARHGEF38Q9NXL2 777 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ABI2Q9NYB9 513 aaPredicted RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 SENP1Q9P0U3 644 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ADAM28Q9UKQ2 775 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 RRP15Q9Y3B9 282 aaKnown RBP11.86□□□□□ -0.51
RAB5C-208ENST00000551338 RAD54BQ9Y620 910 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 PLXNA4Q9HCM2 1894 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 ANAPC1Q9H1A4 1944 aa11.86□□□□□ -0.51
RAB5C-208ENST00000551338 CHD5Q8TDI0 1954 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 A0A1W2PPM1 405 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 A0A1W2PQH9 124 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 F5H423 210 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 SPAG7O75391 227 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 TADA2AO75478 443 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PIAS1O75925 651 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 STK10O94804 968 aaKnown RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 KRT15P19012 456 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 FGFR3P22607 806 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms