RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CFAP52Q8N1V2 620 aa16.57■□□□□ 0.24
COX6A1-203ENST00000550009 LMLNQ96KR4 655 aa16.57■□□□□ 0.24
COX6A1-203ENST00000550009 HSPA12BQ96MM6 686 aa16.57■□□□□ 0.24
COX6A1-203ENST00000550009 PLCB1Q9NQ66 1216 aa16.57■□□□□ 0.24
COX6A1-203ENST00000550009 STOML2Q9UJZ1 356 aa16.57■□□□□ 0.24
COX6A1-203ENST00000550009 ACACBO00763 2458 aa16.57■□□□□ 0.24
COX6A1-203ENST00000550009 CYBBP04839 570 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 ENGP17813 658 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 TBX4P57082 545 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 CETN1Q12798 172 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 PTPRNQ16849 979 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 MPPE1Q53F39 396 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 FSCBQ5H9T9 825 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 SDE2Q6IQ49 451 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 CHST9Q7L1S5 443 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 SYT12Q8IV01 421 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 TRIML1Q8N9V2 468 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 IRGQQ8WZA9 623 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 FAM149B1Q96BN6 582 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 TMA16Q96EY4 203 aaKnown RBP16.56■□□□□ 0.24
COX6A1-203ENST00000550009 HSFY1Q96LI6 401 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
COX6A1-203ENST00000550009 INTS6Q9UL03 887 aaKnown RBP16.56■□□□□ 0.24
COX6A1-203ENST00000550009 DOCK4Q8N1I0 1966 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 ACSL4O60488 711 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 MOCS2O96007 188 aaPredicted RBP16.55■□□□□ 0.24
COX6A1-203ENST00000550009 CFIP05156 583 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 EPHX1P07099 455 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 GNA15P30679 374 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 PEAR1Q5VY43 1037 aaPredicted RBP16.55■□□□□ 0.24
COX6A1-203ENST00000550009 KIAA0907Q7Z7F0 614 aaPredicted RBP16.55■□□□□ 0.24
COX6A1-203ENST00000550009 FAM124AQ86V42 546 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 C11orf74Q86VG3 221 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 CIR1Q86X95 450 aaPredicted RBP16.55■□□□□ 0.24
COX6A1-203ENST00000550009 SLC39A13Q96H72 371 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 CPXM1Q96SM3 734 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 ADAM33Q9BZ11 813 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 PRDM16Q9HAZ2 1276 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 USP36Q9P275 1121 aaKnown RBP16.55■□□□□ 0.24
COX6A1-203ENST00000550009 GGA2Q9UJY4 613 aa16.55■□□□□ 0.24
COX6A1-203ENST00000550009 KMT2BQ9UMN6 2715 aaPredicted RBP16.55■□□□□ 0.24
COX6A1-203ENST00000550009 ZZEF1O43149 2961 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 AP5Z1O43299 807 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 GRAP2O75791 330 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 PABPC1P11940 636 aaKnown RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 SPINK2P20155 84 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 CTSOP43234 321 aaPredicted RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 MTIF2P46199 727 aaKnown RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 TPMTP51580 245 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 STILQ15468 1287 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 ZC3H12AQ5D1E8 599 aaKnown RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 SH3PXD2AQ5TCZ1 1133 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 TMPRSS6Q8IU80 811 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 TOE1Q96GM8 510 aaKnown RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 MYO19Q96H55 970 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 GPR174Q9BXC1 333 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 TMEM245Q9H330 911 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 TMEM9BQ9NQ34 198 aa16.54■□□□□ 0.24
COX6A1-203ENST00000550009 WSB2Q9NYS7 404 aaPredicted RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 EVLQ9UI08 416 aaPredicted RBP16.54■□□□□ 0.24
COX6A1-203ENST00000550009 SYNJ2BP-COX16A0A087WUM0 186 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 FOXN3O00409 490 aaPredicted RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 FOXD2O60548 495 aaPredicted RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 FBXO21O94952 628 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 CLCN1P35523 988 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 NOVA1P51513 510 aaKnown RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 IRAK1P51617 712 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 KCNMA1Q12791 1236 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 LMAN2Q12907 356 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 PDCLQ13371 301 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 EXOC3L4Q17RC7 722 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 FNDC3BQ53EP0 1204 aaKnown RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 RAP1GAP2Q684P5 730 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 MBLAC2Q68D91 279 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 SLC23A3Q6PIS1 610 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 SERPINA13PQ6UXR4 307 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 GBP6Q6ZN66 633 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 TMEM110Q86TL2 294 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 SLC47A2Q86VL8 602 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 C1orf131Q8NDD1 294 aaKnown RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 DEFB124Q8NES8 71 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 SHC3Q92529 594 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 GTPBP2Q9BX10 602 aaKnown RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 SLC2A11Q9BYW1 496 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 CAPN10Q9HC96 672 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 ITM2CQ9NQX7 267 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 SAMSN1Q9NSI8 373 aaKnown RBP16.53■□□□□ 0.24
COX6A1-203ENST00000550009 COX16Q9P0S2 106 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 APEX2Q9UBZ4 518 aa16.53■□□□□ 0.24
COX6A1-203ENST00000550009 CACNA1BQ00975 2339 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 DMXL2Q8TDJ6 3036 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 CABIN1Q9Y6J0 2220 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 IGLV3-25P01717 112 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 ERBB2P04626 1255 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 TFE3P19532 575 aaPredicted RBP16.52■□□□□ 0.24
COX6A1-203ENST00000550009 PMLP29590 882 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 CD6P30203 668 aa16.52■□□□□ 0.24
COX6A1-203ENST00000550009 GGCXP38435 758 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms