RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	SLC2A14	Q8TDB8	520 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SORCS1	Q8WY21	1168 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	BIRC7	Q96CA5	298 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PIWIL1	Q96J94	861 aa	Known RBP	13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PCED1A	Q9H1Q7	454 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	MMRN2	Q9H8L6	949 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	APOBEC3G	Q9HC16	384 aa	Known RBP	13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TMEM8A	Q9HCN3	771 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	RMND1	Q9NWS8	449 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ELOVL2	Q9NXB9	296 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	FTSJ1	Q9UET6	329 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	AK5	Q9Y6K8	562 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	COL6A6	A6NMZ7	2263 aa		13.83	□□□□□ -0.2
RACGAP1-211	ENST00000548247	MYLK	Q15746	1914 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TP53BP1	Q12888	1972 aa	Predicted RBP	13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TEX51	A0A1B0GUA7	166 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	RRP8	O43159	456 aa	Known RBP	13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CYP26A1	O43174	497 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	STC2	O76061	302 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	MAP3K7CL	P57077	242 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	MCCD1	P59942	119 aa	Predicted RBP	13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	GOLGA8F	Q08AF8	430 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	GOLGA8DP	Q0D2H9	430 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	3e-6	■■■■□ 20.8
RACGAP1-211	ENST00000548247	DNAJC3	Q13217	504 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TEAD4	Q15561	434 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PRAMEF14	Q5SWL7	426 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TMEM215	Q68D42	235 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	GPR155	Q7Z3F1	870 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	GATAD2A	Q86YP4	633 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	C12orf29	Q8N999	325 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CCDC150	Q8NCX0	1101 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	UCMA	Q8WVF2	138 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	EEF2KMT	Q96G04	330 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TWNK	Q96RR1	684 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ORAI3	Q9BRQ5	295 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	NIF3L1	Q9GZT8	377 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	FBXO44	Q9H4M3	255 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CYP3A43	Q9HB55	503 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CSNK1G1	Q9HCP0	422 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	FAM49B	Q9NUQ9	324 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	COL5A1	P20908	1838 aa	Predicted RBP	13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PIEZO2	Q9H5I5	2752 aa		13.82	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ENC1	O14682	589 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CAPN9	O14815	690 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CETN3	O15182	167 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PAPSS1	O43252	624 aa	Predicted RBP	13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SMC2	O95347	1197 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	EPB41	P11171	864 aa	Known RBP	13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	RARG	P13631	454 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	GTF2H1	P32780	548 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	HNF1B	P35680	557 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PRCP	P42785	496 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PLA2G4A	P47712	749 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	INCA1	Q0VD86	236 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	RTP5	Q14D33	572 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	KRT39	Q6A163	491 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	OR2T3	Q8NH03	318 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SNIP1	Q8TAD8	396 aa	Known RBP	13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	GSDMA	Q96QA5	445 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	NT5C1A	Q9BXI3	368 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CIPC	Q9C0C6	399 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	DNMT3L	Q9UJW3	386 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PCDHGA1	Q9Y5H4	931 aa		13.81	□□□□□ -0.2
RACGAP1-211	ENST00000548247		A0A1B0GTQ1	180 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247		A0A1W2PQH9	124 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	HHLA1	C9JL84	531 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TSPAN3	O60637	253 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	FSBP	O95073	299 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	FAM200B	P0CF97	657 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CD58	P19256	250 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TRIM21	P19474	475 aa	Known RBP	13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CD27	P26842	260 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ADORA2B	P29275	332 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	MXI1	P50539	228 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TLE3	Q04726	772 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	CAMK2G	Q13555	558 aa	Predicted RBP	13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	COBLL1	Q53SF7	1204 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	C10orf120	Q5SQS8	335 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	KLHDC10	Q6PID8	442 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SERPINA13P	Q6UXR4	307 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ANKS1B	Q7Z6G8	1248 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ZNF366	Q8N895	744 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SPATA20	Q8TB22	786 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SEMA4D	Q92854	862 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	ERCC4	Q92889	916 aa	Predicted RBP	13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SMARCE1	Q969G3	411 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	JAKMIP2	Q96AA8	810 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TIGD1	Q96MW7	591 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	HNRNPAB	Q99729	332 aa	Known RBP	13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	TSG101	Q99816	390 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	NRSN2	Q9GZP1	204 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	LHX5	Q9H2C1	402 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	SCML2	Q9UQR0	700 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PCDHA5	Q9Y5H7	936 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PLXNA2	O75051	1894 aa		13.8	□□□□□ -0.2
RACGAP1-211	ENST00000548247	PTPN13	Q12923	2485 aa		13.79	□□□□□ -0.2
RACGAP1-211	ENST00000548247	STX10	O60499	249 aa		13.79	□□□□□ -0.2

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