RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ATP5C1P36542 298 aaKnown RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 ADCY8P40145 1251 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 MAGEA10P43363 369 aaPredicted RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 RPL21P46778 160 aaKnown RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 PGFP49763 221 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 PAFAH1B3Q15102 231 aaKnown RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 NUGGCQ68CJ6 796 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 NCBP2-AS2Q69YL0 99 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 ELMSAN1Q6PJG2 1045 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 C4orf22Q6V702 233 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 CEP128Q6ZU80 1094 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 UNC45BQ8IWX7 931 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 SPPL3Q8TCT6 385 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 POF1BQ8WVV4 589 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 TBC1D31Q96DN5 1066 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 SLC39A13Q96H72 371 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 BTN2A3PQ96KV6 586 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 C1orf74Q96LT6 269 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 TGS1Q96RS0 853 aaKnown RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 FMO2Q99518 471 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 BRD8Q9H0E9 1235 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 CATSPERBQ9H7T0 1116 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 SNX24Q9Y343 169 aa12.79□□□□□ -0.36
RAB5B-204ENST00000548068 MTCL1Q9Y4B5 1905 aaKnown RBP12.79□□□□□ -0.36
RAB5B-204ENST00000548068 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 BCLAF3A2AJT9 711 aaKnown RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 ZNF840PA6NDX5 716 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 C2orf71A6NGG8 1288 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 SMAPO00193 183 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 PPP1R12AO14974 1030 aaPredicted RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 DCLK1O15075 740 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 PAGE1O75459 146 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 STK10O94804 968 aaKnown RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 SEC31AO94979 1220 aaKnown RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 FGF19O95750 216 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 PDK1Q15118 436 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 SLC45A4Q5BKX6 768 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 PLPP4Q5VZY2 271 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 LILRA6Q6PI73 481 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 NPNTQ6UXI9 565 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 LRRC31Q6UY01 552 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 PCGF5Q86SE9 256 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 KREMEN2Q8NCW0 462 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 PLD4Q96BZ4 506 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 TMEM121Q9BTD3 319 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 ALG13Q9NP73 1137 aaKnown RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 SAE1Q9UBE0 346 aaPredicted RBP12.78□□□□□ -0.36
RAB5B-204ENST00000548068 DPP7Q9UHL4 492 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 NUDT5Q9UKK9 219 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 OBSL1O75147 1896 aa12.78□□□□□ -0.36
RAB5B-204ENST00000548068 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 LRIG2O94898 1065 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 MOCS2O96007 188 aaPredicted RBP12.77□□□□□ -0.37
RAB5B-204ENST00000548068 IFNB1P01574 187 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 IGLV3-27P01718 113 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 C8AP07357 584 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ERCC2P18074 760 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 MX2P20592 715 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 EPHB2P29323 1055 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 HOXC13P31276 330 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ERVFC1P60507 584 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 COG7P83436 770 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.37
RAB5B-204ENST00000548068 C9orf50Q5SZB4 431 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 DNAJB7Q7Z6W7 309 aaPredicted RBP12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ZC3H18Q86VM9 953 aaKnown RBP12.77□□□□□ -0.37
RAB5B-204ENST00000548068 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAB5B-204ENST00000548068 MIB1Q86YT6 1006 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 MREGQ8N565 214 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 LZTR1Q8N653 840 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 TFB1MQ8WVM0 346 aaKnown RBP12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ART4Q93070 314 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 RTP4Q96DX8 246 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 OLFM3Q96PB7 478 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 GCNAQ96QF7 691 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 SIK2Q9H0K1 926 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 CCSER2Q9H7U1 834 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 VIPAS39Q9H9C1 493 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ANLNQ9NQW6 1124 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 GRHL1Q9NZI5 618 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ANAPC5Q9UJX4 755 aa12.77□□□□□ -0.37
RAB5B-204ENST00000548068 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 I6L893 689 aaPredicted RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 DNALI1O14645 258 aaPredicted RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 MTSS1O43312 755 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 MFSD11O43934 449 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 CA3P07451 260 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms