RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 TYRP14679 529 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 CTHP32929 405 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 ADRA1BP35368 520 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 ARHGAP25P42331 645 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 AIF1P55008 147 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 HDAC4P56524 1084 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 RABGAP1LQ5R372 815 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 MPP7Q5T2T1 576 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 SH3PXD2AQ5TCZ1 1133 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 PIK3R6Q5UE93 754 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 OTUD1Q5VV17 481 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-213ENST00000546820 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 SLFN11Q7Z7L1 901 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 CHSY1Q86X52 802 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 ZNF557Q8N988 423 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-213ENST00000546820 SLC35G2Q8TBE7 412 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 ZNF564Q8TBZ8 553 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-213ENST00000546820 CALR3Q96L12 384 aaKnown RBP14.26□□□□□ -0.13
PTCH1-213ENST00000546820 SIK2Q9H0K1 926 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 CALCOCO1Q9P1Z2 691 aa14.26□□□□□ -0.13
PTCH1-213ENST00000546820 KANSL1LA0AUZ9 987 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 TRDMT1O14717 391 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 ARHGAP6O43182 974 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 TACR2P21452 398 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 PCK1P35558 622 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 EIF2DP41214 584 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 NOP2P46087 812 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 SOX9P48436 509 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 ATXN1P54253 815 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 VCPP55072 806 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 OGDHQ02218 1023 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 GRSF1Q12849 480 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 TCEAL1Q15170 157 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 FAM133BQ5BKY9 247 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 MS4A13Q5J8X5 152 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 RFWD3Q6PCD5 774 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 KIAA1328Q86T90 577 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 TMEM139Q8IV31 216 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 LGI2Q8N0V4 545 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 NIPA2Q8N8Q9 360 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 HJURPQ8NCD3 748 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-213ENST00000546820 RFFLQ8WZ73 363 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 CD101Q93033 1021 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 NTAN1Q96AB6 310 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 PNKPQ96T60 521 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 P2RY13Q9BPV8 354 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 SLC2A11Q9BYW1 496 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 ADAM33Q9BZ11 813 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 EPHX3Q9H6B9 360 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 DEC1Q9P2X7 70 aa14.25□□□□□ -0.13
PTCH1-213ENST00000546820 TICRRQ7Z2Z1 1910 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 DLL1O00548 723 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 PRPSAP2O60256 369 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 PENKP01210 267 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-213ENST00000546820 DRD1P21728 446 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 KCNA4P22459 653 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 SLC6A4P31645 630 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 GALK1P51570 392 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 AUHQ13825 339 aaKnown RBP14.24□□□□□ -0.13
PTCH1-213ENST00000546820 HADHQ16836 314 aaKnown RBP14.24□□□□□ -0.13
PTCH1-213ENST00000546820 BOLA3Q53S33 107 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 EFHC2Q5JST6 749 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 IER5LQ5T953 404 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 TTC39BQ5VTQ0 682 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-213ENST00000546820 FYB2Q5VWT5 728 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 NADSYN1Q6IA69 706 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 NAT16Q8N8M0 369 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 FLCNQ8NFG4 579 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 CCDC26Q8TAB7 109 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 PBXIP1Q96AQ6 731 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 OSBPL6Q9BZF3 934 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 TRIM7Q9C029 511 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 OSBPL2Q9H1P3 480 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 TBC1D17Q9HA65 648 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 XPO7Q9UIA9 1087 aaKnown RBP14.24□□□□□ -0.13
PTCH1-213ENST00000546820 HS3ST4Q9Y661 456 aa14.24□□□□□ -0.13
PTCH1-213ENST00000546820 KIF26AQ9ULI4 1882 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-213ENST00000546820 A0A0A6YYK5 440 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 FAM170BA6NMN3 283 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 GFRA2O00451 464 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 CACNG3O60359 315 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 TBL1XO60907 577 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 MTA2O94776 668 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 APODP05090 189 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 CD72P21854 359 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 GRIA2P42262 883 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 SSR1P43307 286 aaKnown RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 VAV2P52735 878 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 NAP1L1P55209 391 aaKnown RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 KIF5AQ12840 1032 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 MESDQ14696 234 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 UBXN2BQ14CS0 331 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 PON2Q15165 354 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 FBXL22Q6P050 247 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 BMP8AQ7Z5Y6 402 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 PSTKQ8IV42 348 aaKnown RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 BHMTQ93088 406 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms