RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FAM58BPP0C7Q3 252 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 ZNF143P52747 638 aaPredicted RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 RHOAP61586 193 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 SFSWAPQ12872 951 aaKnown RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 PLD1Q13393 1074 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 CYP51A1Q16850 503 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 TMEM169Q96HH4 297 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 OSMRQ99650 979 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 FAM198AQ9UFP1 575 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 CLCA2Q9UQC9 943 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 PCDHA11Q9Y5I1 949 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 PDE2AO00408 941 aaPredicted RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 CYP1A1P04798 512 aaPredicted RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 DUPD1Q68J44 220 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 TMEM161BQ8NDZ6 487 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 STK32AQ8WU08 396 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 STN1Q9H668 368 aaKnown RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 CROTQ9UKG9 612 aa12.82□□□□□ -0.36
COL4A6-209ENST00000545689 RPL26L1Q9UNX3 145 aaKnown RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 SCAF8Q9UPN6 1271 aaKnown RBP12.82□□□□□ -0.36
COL4A6-209ENST00000545689 hCG_2014768A0A024R1R8 64 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 A0A096LPK6 155 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 CLPTM1O96005 669 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 SERPINB1P30740 379 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 SSTR1P30872 391 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 RAP1GDS1P52306 607 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 FAAP100Q0VG06 881 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 GALNTL6Q49A17 601 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 OVOS1Q6IE37 1185 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 DNAAF5Q86Y56 855 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 DDHD1Q8NEL9 900 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 OPTNQ96CV9 577 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MRC1P22897 1456 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 WNT10BO00744 389 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ZNF286BP0CG31 522 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 RRM2P31350 389 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 RAD23AP54725 363 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 TBX4P57082 545 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 FBXW4P57775 412 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 FUT11Q495W5 492 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ACMSDQ8TDX5 336 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 PRDM5Q9NQX1 630 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-209ENST00000545689 C15orf41Q9Y2V0 281 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ATP6V1B1P15313 513 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 FASP25445 335 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 CASP5P51878 434 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MFSD10Q14728 455 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 AGKQ53H12 422 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 SDE2Q6IQ49 451 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ITIH5Q86UX2 942 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 CYP4Z1Q86W10 505 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MIB1Q86YT6 1006 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MICU2Q8IYU8 434 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ABHD16BQ9H3Z7 469 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 CYP4F12Q9HCS2 524 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 SPASTQ9UBP0 616 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 DYRK1BQ9Y463 629 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MLNP12872 115 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 AUHQ13825 339 aaKnown RBP12.81□□□□□ -0.36
COL4A6-209ENST00000545689 DEPDC1Q5TB30 811 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
COL4A6-209ENST00000545689 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 RICTORQ6R327 1708 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 TMEM114B3SHH9 223 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 F8W810 466 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 RAMP2O60895 175 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ADRB2P07550 413 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 PSMD7P51665 324 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ZNF284Q2VY69 593 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 OLFML2BQ68BL8 750 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 ZBTB49Q6ZSB9 765 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 DEFB106AQ8N104 65 aa12.81□□□□□ -0.36
COL4A6-209ENST00000545689 IFT172Q9UG01 1749 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 UPP2O95045 317 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 KRT6AP02538 564 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 KRT6BP04259 564 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 ALOX15P16050 662 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 AMPD1P23109 780 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 YY1P25490 414 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 KRT6CP48668 564 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 IRGCQ6NXR0 463 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 KCNT2Q6UVM3 1135 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 IL22Q9GZX6 179 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 NMRK2Q9NPI5 230 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 A0A0A0MRY4 1105 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 FSCN2O14926 492 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 ZBTB22O15209 634 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-209ENST00000545689 MYL4P12829 197 aa12.8□□□□□ -0.36
COL4A6-209ENST00000545689 NOS2P35228 1153 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms