RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 MLLT6P55198 1093 aaPredicted RBP17.73■□□□□ 0.43
LIG1-204ENST00000542460 SCAPQ12770 1279 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 HADHQ16836 314 aaKnown RBP17.73■□□□□ 0.43
LIG1-204ENST00000542460 BOLA3Q53S33 107 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 FAM133BQ5BKY9 247 aaKnown RBP17.73■□□□□ 0.43
LIG1-204ENST00000542460 MS4A13Q5J8X5 152 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 DAB2IPQ5VWQ8 1189 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 NADSYN1Q6IA69 706 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 C11orf63Q6NUN7 778 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 IRX2Q9BZI1 471 aaPredicted RBP17.73■□□□□ 0.43
LIG1-204ENST00000542460 SIK2Q9H0K1 926 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 CD320Q9NPF0 282 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 LZTFL1Q9NQ48 299 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 SPHK2Q9NRA0 654 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 TMPRSS4Q9NRS4 437 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 GUCA1BQ9UMX6 200 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 HS3ST4Q9Y661 456 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
LIG1-204ENST00000542460 GOLGA6L7A0A1B0GV03 622 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 ARSAP15289 507 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 PFKPQ01813 784 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 TNK2Q07912 1038 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 NR1H3Q13133 447 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 RUNX3Q13761 415 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 EFHC2Q5JST6 749 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 ERMARDQ5T6L9 678 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 PIK3R6Q5UE93 754 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 RHBDF2Q6PJF5 856 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 DAAM2Q86T65 1068 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 PSTKQ8IV42 348 aaKnown RBP17.72■□□□□ 0.43
LIG1-204ENST00000542460 CPA6Q8N4T0 437 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 DNASE1L2Q92874 299 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 OSBPL2Q9H1P3 480 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 ECT2Q9H8V3 914 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 HPS4Q9NQG7 708 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 SLC2A4RGQ9NR83 387 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 FZD10Q9ULW2 581 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 DUSP12Q9UNI6 340 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 ALG6Q9Y672 507 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 NARSO43776 548 aaKnown RBP17.72■□□□□ 0.43
LIG1-204ENST00000542460 MOCS3O95396 460 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 ADH1CP00326 375 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 TCF4P15884 667 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 TACR2P21452 398 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 SLC6A4P31645 630 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 SLC25A11Q02978 314 aaKnown RBP17.72■□□□□ 0.43
LIG1-204ENST00000542460 DHCR24Q15392 516 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 ITPRIPL2Q3MIP1 535 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 LY6G5CQ5SRR4 150 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 RAP1GAP2Q684P5 730 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 CHSY1Q86X52 802 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 TMEM25Q86YD3 366 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 CSGALNACT1Q8TDX6 532 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 PRMT1Q99873 361 aaKnown RBP17.72■□□□□ 0.43
LIG1-204ENST00000542460 GTSE1Q9NYZ3 720 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 OR12D3Q9UGF7 316 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 PYCARDQ9ULZ3 195 aa17.72■□□□□ 0.43
LIG1-204ENST00000542460 F5H5T6 163 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 GFRA2O00451 464 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 SPOPO43791 374 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 CYBBP04839 570 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 CYP17A1P05093 508 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 COMTP21964 271 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 IL1R2P27930 398 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
LIG1-204ENST00000542460 AUHQ13825 339 aaKnown RBP17.71■□□□□ 0.43
LIG1-204ENST00000542460 MPPE1Q53F39 396 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 RFWD3Q6PCD5 774 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 TPGS1Q6ZTW0 290 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 CYP4V2Q6ZWL3 525 aaPredicted RBP17.71■□□□□ 0.43
LIG1-204ENST00000542460 CPNE8Q86YQ8 564 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 TMA16Q96EY4 203 aaKnown RBP17.71■□□□□ 0.43
LIG1-204ENST00000542460 SNRNP25Q9BV90 132 aaKnown RBP17.71■□□□□ 0.43
LIG1-204ENST00000542460 ZWILCHQ9H900 591 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 MARK1Q9P0L2 795 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 AP4E1Q9UPM8 1137 aa17.71■□□□□ 0.43
LIG1-204ENST00000542460 OTOL1A6NHN0 477 aaPredicted RBP17.7■□□□□ 0.42
LIG1-204ENST00000542460 TRDMT1O14717 391 aaKnown RBP17.7■□□□□ 0.42
LIG1-204ENST00000542460 TSPAN3O60637 253 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 KRT7P08729 469 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 TAS2R40P59535 323 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
LIG1-204ENST00000542460 GAD2Q05329 585 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 FBXL22Q6P050 247 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 LRRC31Q6UY01 552 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 REXO1L1PQ8IX06 675 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 UBALD2Q8IYN6 164 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 LGI2Q8N0V4 545 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 LRRC57Q8N9N7 239 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 TEKT4Q8WW24 435 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 GOLPH3Q9H4A6 298 aa17.7■□□□□ 0.42
LIG1-204ENST00000542460 TYW5A2RUC4 315 aaKnown RBP17.69■□□□□ 0.42
LIG1-204ENST00000542460 GRID2IPA4D2P6 1211 aa17.69■□□□□ 0.42
LIG1-204ENST00000542460 PALMO75781 387 aa17.69■□□□□ 0.42
LIG1-204ENST00000542460 RARAP10276 462 aa17.69■□□□□ 0.42
LIG1-204ENST00000542460 ADH5P11766 374 aa17.69■□□□□ 0.42
LIG1-204ENST00000542460 L1CAMP32004 1257 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms