RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 FAM71BQ8TC56 605 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 MRPS31Q92665 395 aaKnown RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 NMUR1Q9HB89 426 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 TRPC7Q9HCX4 862 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 DDIT4Q9NX09 232 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 FZD10Q9ULW2 581 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 MYO16Q9Y6X6 1858 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 CCDC151A5D8V7 595 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 ZNF840PA6NDX5 716 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 SP100P23497 879 aaPredicted RBP28.79■■■□□ 2.2
CCM2-218ENST00000541586 KCNJ1P48048 391 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 DPYSL2Q16555 572 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 STXBP5Q5T5C0 1151 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 TXNDC8Q6A555 127 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 CCDC105Q8IYK2 499 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 PDZD8Q8NEN9 1154 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 RUNDC3BQ96NL0 473 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 FAM118BQ9BPY3 351 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 DHX35Q9H5Z1 703 aaKnown RBP28.79■■■□□ 2.2
CCM2-218ENST00000541586 FAM204AQ9H8W3 233 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 EPB41L5Q9HCM4 733 aa28.79■■■□□ 2.2
CCM2-218ENST00000541586 NOTCH4Q99466 2003 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 CST8O60676 142 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 MOSPD3O75425 235 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 CEBPBP17676 345 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 IL4RP24394 825 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 L1CAMP32004 1257 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 PTGIRP43119 386 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 LEXMQ3ZCV2 418 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 BBS12Q6ZW61 710 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 RFX6Q8HWS3 928 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 DQX1Q8TE96 717 aaKnown RBP28.78■■■□□ 2.2
CCM2-218ENST00000541586 OVCA2Q8WZ82 227 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 SUSD6Q92537 303 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 NECTIN4Q96NY8 510 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 MAGEB5Q9BZ81 275 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 GDF3Q9NR23 364 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 OSER1Q9NX31 292 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 NUDT5Q9UKK9 219 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 UNC80Q8N2C7 3258 aa28.78■■■□□ 2.2
CCM2-218ENST00000541586 PPP3CCP48454 512 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 DYNLT1P63172 113 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 PPP6R3Q5H9R7 873 aaPredicted RBP28.77■■■□□ 2.2
CCM2-218ENST00000541586 GPR158Q5T848 1215 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 PTCRAQ6ISU1 281 aaPredicted RBP28.77■■■□□ 2.2
CCM2-218ENST00000541586 TAC4Q86UU9 113 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 VSIG1Q86XK7 387 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 PSTKQ8IV42 348 aaKnown RBP28.77■■■□□ 2.2
CCM2-218ENST00000541586 IFT20Q8IY31 132 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 MAB21L3Q8N8X9 362 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.77■■■□□ 2.21e-8■■□□□ 13.3
CCM2-218ENST00000541586 ESYT3A0FGR9 886 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 C2orf78A6NCI8 922 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 F9P00740 461 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 ARHGAP15Q53QZ3 475 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 CCNI2Q6ZMN8 369 aaPredicted RBP28.77■■■□□ 2.2
CCM2-218ENST00000541586 JAMLQ86YT9 394 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 KCTD15Q96SI1 283 aaPredicted RBP28.77■■■□□ 2.2
CCM2-218ENST00000541586 ZNF670Q9BS34 389 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 TRIM51Q9BSJ1 452 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 MAK16Q9BXY0 300 aaKnown RBP28.77■■■□□ 2.2
CCM2-218ENST00000541586 TMPRSS4Q9NRS4 437 aa28.77■■■□□ 2.2
CCM2-218ENST00000541586 FAM187AA6NFU0 413 aa28.76■■■□□ 2.19
CCM2-218ENST00000541586 BHMG1C9JSJ3 638 aaPredicted RBP28.76■■■□□ 2.19
CCM2-218ENST00000541586 ARHGAP18Q8N392 663 aa28.76■■■□□ 2.19
CCM2-218ENST00000541586 HAUS1Q96CS2 278 aa28.76■■■□□ 2.19
CCM2-218ENST00000541586 RNF157Q96PX1 679 aa28.76■■■□□ 2.19
CCM2-218ENST00000541586 CYP2S1Q96SQ9 504 aa28.76■■■□□ 2.19
CCM2-218ENST00000541586 CCSER2Q9H7U1 834 aa28.76■■■□□ 2.19
CCM2-218ENST00000541586 IGLV3-25P01717 112 aa28.75■■■□□ 2.19
CCM2-218ENST00000541586 ZDHHC11BP0C7U3 371 aa28.75■■■□□ 2.19
CCM2-218ENST00000541586 MYBL2P10244 700 aa28.75■■■□□ 2.19
CCM2-218ENST00000541586 GBP2P32456 591 aaPredicted RBP28.75■■■□□ 2.19
CCM2-218ENST00000541586 ANKRD20A8PQ5CZ79 823 aa28.75■■■□□ 2.19
CCM2-218ENST00000541586 PYROXD2Q8N2H3 581 aa28.75■■■□□ 2.19
CCM2-218ENST00000541586 FGF13Q92913 245 aa28.75■■■□□ 2.19
CCM2-218ENST00000541586 ZNF487B1APH4 448 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 LIASO43766 372 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 TBX18O95935 607 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 RARGP13631 454 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 TNFRSF8P28908 595 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 CXCR3P49682 368 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 TRADDQ15628 312 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 HECTD3Q5T447 861 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 SND1Q7KZF4 910 aaKnown RBP eCLIP28.74■■■□□ 2.19
CCM2-218ENST00000541586 HNRNPLLQ8WVV9 542 aaKnown RBP28.74■■■□□ 2.19
CCM2-218ENST00000541586 CASKIN2Q8WXE0 1202 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 SLCO2A1Q92959 643 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 NTAN1Q96AB6 310 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 FAF2Q96CS3 445 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 ZSWIM3Q96MP5 696 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 THEGQ9P2T0 379 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 SAE1Q9UBE0 346 aaPredicted RBP28.74■■■□□ 2.19
CCM2-218ENST00000541586 UTP11Q9Y3A2 253 aaKnown RBP28.74■■■□□ 2.19
CCM2-218ENST00000541586 TLR5O60602 858 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 ERLIN1O75477 346 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 ADRA1BP35368 520 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 PSEN1P49768 467 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 AIF1P55008 147 aa28.74■■■□□ 2.19
CCM2-218ENST00000541586 TFDP2Q14188 446 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms