RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 HSF5Q4G112 596 aaPredicted RBP17.53■□□□□ 0.4
CD9-209ENST00000540891 LRSAM1Q6UWE0 723 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 WDR5BQ86VZ2 330 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 ZNF513Q8N8E2 541 aaPredicted RBP17.53■□□□□ 0.4
CD9-209ENST00000540891 SUMF1Q8NBK3 374 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 NT5C3BQ969T7 300 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 ACOX2Q99424 681 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 C11orf70Q9BRQ4 267 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 SLC2A11Q9BYW1 496 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 IRX2Q9BZI1 471 aaPredicted RBP17.53■□□□□ 0.4
CD9-209ENST00000540891 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.53■□□□□ 0.4
CD9-209ENST00000540891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.53■□□□□ 0.4
CD9-209ENST00000540891 COX16Q9P0S2 106 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 CCDC163A0A0D9SF12 145 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 M0QYT0 321 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 GFRA3O60609 400 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 TBL1XO60907 577 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 HLA-FP30511 346 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 NME3Q13232 169 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 FIGNQ5HY92 759 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 MS4A13Q5J8X5 152 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 MPP7Q5T2T1 576 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 TMEM215Q68D42 235 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 NUDT18Q6ZVK8 323 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 PHLDB2Q86SQ0 1253 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 WFDC5Q8TCV5 224 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 BTN2A3PQ96KV6 586 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 PRMT1Q99873 361 aaKnown RBP17.52■□□□□ 0.4
CD9-209ENST00000540891 EPC1Q9H2F5 836 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 ANLNQ9NQW6 1124 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 PIGVQ9NUD9 493 aa17.52■□□□□ 0.4
CD9-209ENST00000540891 APBB3O95704 486 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 CCR1P32246 355 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 GBP1P32455 592 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 SULT1E1P49888 294 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 GSCP56915 257 aaPredicted RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 RPS24P62847 133 aaKnown RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 EOGTQ5NDL2 527 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 RAP1GAP2Q684P5 730 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 ARCQ7LC44 396 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 BNIPLQ7Z465 357 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 ANKS1BQ7Z6G8 1248 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 KIAA0907Q7Z7F0 614 aaPredicted RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 RASSF3Q86WH2 238 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 PHF13Q86YI8 300 aaPredicted RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 PGAP3Q96FM1 320 aaPredicted RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 LMLNQ96KR4 655 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 TBCBQ99426 244 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 DDX50Q9BQ39 737 aaKnown RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 EDEM3Q9BZQ6 932 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 TSPY26PQ9H489 355 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 CD248Q9HCU0 757 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 METTL5Q9NRN9 209 aaKnown RBP17.51■□□□□ 0.39
CD9-209ENST00000540891 RRN3Q9NYV6 651 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 AIPL1Q9NZN9 384 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 IFNKQ9P0W0 207 aa17.51■□□□□ 0.39
CD9-209ENST00000540891 I6L893 689 aaPredicted RBP17.5■□□□□ 0.39
CD9-209ENST00000540891 GJB6O95452 261 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 CCDC172P0C7W6 258 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 SLC2A3P11169 496 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 TACR2P21452 398 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 NTSR1P30989 418 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 WASP42768 502 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 NSFP46459 744 aaKnown RBP17.5■□□□□ 0.39
CD9-209ENST00000540891 ATXN1P54253 815 aaKnown RBP17.5■□□□□ 0.39
CD9-209ENST00000540891 SLC25A52Q3SY17 297 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 MON1BQ7L1V2 547 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 CHSY1Q86X52 802 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 CFAP52Q8N1V2 620 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 EMC1Q8N766 993 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.5■□□□□ 0.39
CD9-209ENST00000540891 ATP6V0D2Q8N8Y2 350 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 HJURPQ8NCD3 748 aaPredicted RBP17.5■□□□□ 0.39
CD9-209ENST00000540891 TSTD1Q8NFU3 115 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 SEPT11Q9NVA2 429 aaKnown RBP17.5■□□□□ 0.39
CD9-209ENST00000540891 ADAM22Q9P0K1 906 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 STIM2Q9P246 746 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 EBF1Q9UH73 591 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 STAP1Q9ULZ2 295 aa17.5■□□□□ 0.39
CD9-209ENST00000540891 A0A1W2PQF6 199 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 TCRBV5S1A1TA0A578 114 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 AXIN1O15169 862 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 CD70P32970 193 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 CNR2P34972 360 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 PRKCIP41743 596 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 CXCR3P49682 368 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 DGKEP52429 567 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 ASIC2Q16515 512 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 SFMBT2Q5VUG0 894 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 ANO7Q6IWH7 933 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 ZNF571Q7Z3V5 609 aaPredicted RBP17.49■□□□□ 0.39
CD9-209ENST00000540891 TRMT11Q7Z4G4 463 aaKnown RBP17.49■□□□□ 0.39
CD9-209ENST00000540891 ADIPOR2Q86V24 386 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 LGI2Q8N0V4 545 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 MDGA1Q8NFP4 955 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 JOSD2Q8TAC2 188 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 SORCS1Q8WY21 1168 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms