RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 KCTD13Q8WZ19 329 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 TFAP2BQ92481 460 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 SLC35C1Q96A29 364 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 NUP58Q9BVL2 599 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 ZDHHC5Q9C0B5 715 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 ABCB8Q9NUT2 735 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 EIF2B4Q9UI10 523 aaKnown RBP16.94■□□□□ 0.3
TRIM65-203ENST00000540812 SLCO1B1Q9Y6L6 691 aa16.94■□□□□ 0.3
TRIM65-203ENST00000540812 FAM221BA6H8Z2 402 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 PIK3R2O00459 728 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 CBFA2T3O75081 653 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 CALCAP01258 141 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 FTH1P19P0C7X4 201 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 SETSIPP0DME0 302 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 DAOAP59103 153 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 YWHAEP62258 255 aaKnown RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 CAMK2GQ13555 558 aaPredicted RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 E2F5Q15329 346 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 PTPRNQ16849 979 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 FNDC3BQ53EP0 1204 aaKnown RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 ADGRF1Q5T601 910 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 LCLAT1Q6UWP7 414 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 CHST9Q7L1S5 443 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 PNPLA1Q8N8W4 532 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 WFIKKN2Q8TEU8 576 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 TMA16Q96EY4 203 aaKnown RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 CCDC34Q96HJ3 373 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 ZSWIM1Q9BR11 485 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 LHX5Q9H2C1 402 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 TMEM245Q9H330 911 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 C6orf106Q9H6K1 298 aaPredicted RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 CNGB3Q9NQW8 809 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 ARMCX3Q9UH62 379 aaPredicted RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 FNDC3AQ9Y2H6 1198 aaKnown RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 PCDHB9Q9Y5E1 797 aa16.93■□□□□ 0.3
TRIM65-203ENST00000540812 ANKRD11Q6UB99 2663 aaPredicted RBP16.93■□□□□ 0.3
TRIM65-203ENST00000540812 GOLGA6L7A0A1B0GV03 622 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 RDXP35241 583 aaKnown RBP16.92■□□□□ 0.3
TRIM65-203ENST00000540812 PMF1Q6P1K2 205 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 RFWD3Q6PCD5 774 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 TMEM270Q6UE05 265 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 KIAA0907Q7Z7F0 614 aaPredicted RBP16.92■□□□□ 0.3
TRIM65-203ENST00000540812 SCML4Q8N228 414 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■□□□ 13.8
TRIM65-203ENST00000540812 CLEC4CQ8WTT0 213 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 KAT5Q92993 513 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 GAREM1Q9H706 876 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 ABCC13Q9NSE7 274 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 GGA2Q9UJY4 613 aa16.92■□□□□ 0.3
TRIM65-203ENST00000540812 MUC22E2RYF6 1773 aaPredicted RBP16.92■□□□□ 0.3
TRIM65-203ENST00000540812 CABIN1Q9Y6J0 2220 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 RNF225M0QZC1 329 aaPredicted RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 TAF4O00268 1085 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 LATS1O95835 1130 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 PABPC1P11940 636 aaKnown RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 TBXAS1P24557 533 aaPredicted RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 BRD2P25440 801 aaKnown RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 SLC6A4P31645 630 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 CD70P32970 193 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 ACSL1P33121 698 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 ANP32AP39687 249 aaKnown RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 FMO5P49326 533 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 ZNF445P59923 1031 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 RPS14P62263 151 aaKnown RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 LRRC63Q05C16 580 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 HLA-BQ31612 363 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
TRIM65-203ENST00000540812 MBLAC2Q68D91 279 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 MSANTD2Q6P1R3 559 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 SLCO6A1Q86UG4 719 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 ENGASEQ8NFI3 743 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 ADAMTS14Q8WXS8 1223 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 SNX19Q92543 992 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 PCOLCE2Q9UKZ9 415 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 KIAA1257Q9ULG3 409 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 PCDHB4Q9Y5E5 795 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 ATRXP46100 2492 aa16.91■□□□□ 0.3
TRIM65-203ENST00000540812 A0A1B0GVT2 93 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 M0QYV0 167 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 TBL1XO60907 577 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 SMC2O95347 1197 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 IGLV3-27P01718 113 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 CAPNS1P04632 268 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 PAEPP09466 180 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 C7P10643 843 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 MATKP42679 507 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 PIK3R6Q5UE93 754 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 NADSYN1Q6IA69 706 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 AHI1Q8N157 1196 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 SETD7Q8WTS6 366 aaKnown RBP16.9■□□□□ 0.3
TRIM65-203ENST00000540812 SMARCE1Q969G3 411 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 MYEOVQ96EZ4 313 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 MTG2Q9H4K7 406 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 PRSS16Q9NQE7 514 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms