RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 FAM131BQ86XD5 332 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 BHMTQ93088 406 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 PBXIP1Q96AQ6 731 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 XPO6Q96QU8 1125 aaKnown RBP16.06■□□□□ 0.16
DDB1-218ENST00000540784 HAPLN3Q96S86 360 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 NCAPGQ9BPX3 1015 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 TRIM7Q9C029 511 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 SIK2Q9H0K1 926 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 RAB6CQ9H0N0 254 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 MARK1Q9P0L2 795 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 IP6K2Q9UHH9 426 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 ANAPC7Q9UJX3 599 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 BDP1A6H8Y1 2624 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 KANSL1LA0AUZ9 987 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 FAM170BA6NMN3 283 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 TACR2P21452 398 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 SLC6A4P31645 630 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 SLC6A11P48066 632 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 PIGHQ14442 188 aaPredicted RBP16.05■□□□□ 0.16
DDB1-218ENST00000540784 ACAP1Q15027 740 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 MS4A13Q5J8X5 152 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 CHSY1Q86X52 802 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 TMEM139Q8IV31 216 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 LGI2Q8N0V4 545 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 FLCNQ8NFG4 579 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 SLC35G2Q8TBE7 412 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 ZNF564Q8TBZ8 553 aaPredicted RBP16.05■□□□□ 0.16
DDB1-218ENST00000540784 CD101Q93033 1021 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 C1orf74Q96LT6 269 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 P2RY13Q9BPV8 354 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 TBC1D17Q9HA65 648 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 PLK2Q9NYY3 685 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 DEC1Q9P2X7 70 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 HS3ST4Q9Y661 456 aa16.05■□□□□ 0.16
DDB1-218ENST00000540784 TYW5A2RUC4 315 aaKnown RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 SHISA7A6NL88 538 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 F5H5T6 163 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 GFRA2O00451 464 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 PENKP01210 267 aaPredicted RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 KRT83P78385 493 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 GRSF1Q12849 480 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDB1-218ENST00000540784 AUHQ13825 339 aaKnown RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 UBXN2BQ14CS0 331 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 PON2Q15165 354 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 PREPLQ4J6C6 727 aaPredicted RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 MPP7Q5T2T1 576 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 FYB2Q5VWT5 728 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 TXNDC11Q6PKC3 985 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 BMP8AQ7Z5Y6 402 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 SLFN11Q7Z7L1 901 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 RHOT2Q8IXI1 618 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 CHFRQ96EP1 664 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 BTBD6Q96KE9 485 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 PNKPQ96T60 521 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 PRMT1Q99873 361 aaKnown RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 ANLNQ9NQW6 1124 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 STIM2Q9P246 746 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 LCMT1Q9UIC8 334 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 NDRG2Q9UN36 371 aaKnown RBP16.04■□□□□ 0.16
DDB1-218ENST00000540784 SIT1Q9Y3P8 196 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 TTC28Q96AY4 2481 aa16.04■□□□□ 0.16
DDB1-218ENST00000540784 NCOR1O75376 2440 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 NCAM2O15394 837 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 NRDCO43847 1150 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 TBL1XO60907 577 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 PDGFBP01127 241 aaPredicted RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 OPRD1P41143 372 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 EIF2DP41214 584 aaKnown RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 ZNF252P-AS1Q0IIN9 211 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 RABGAP1LQ5R372 815 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 FBXL22Q6P050 247 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 LRRC31Q6UY01 552 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 CCDC117Q8IWD4 279 aaPredicted RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 CFAP52Q8N1V2 620 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 HJURPQ8NCD3 748 aaPredicted RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 SLC2A11Q9BYW1 496 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 OSBPL2Q9H1P3 480 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 FBRSL1Q9HCM7 1045 aaKnown RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 LTB4R2Q9NPC1 389 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 PCSK1NQ9UHG2 260 aa16.03■□□□□ 0.16
DDB1-218ENST00000540784 MTF2Q9Y483 593 aaPredicted RBP16.03■□□□□ 0.16
DDB1-218ENST00000540784 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
DDB1-218ENST00000540784 PRPSAP2O60256 369 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 CACNG3O60359 315 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 GPR37L1O60883 481 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 TULP3O75386 442 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 DRD1P21728 446 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 MIPP30301 263 aa16.02■□□□□ 0.16
DDB1-218ENST00000540784 NOP2P46087 812 aaKnown RBP16.02■□□□□ 0.16
DDB1-218ENST00000540784 CLCN5P51795 746 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms