RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TMPRSS6Q8IU80 811 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 ZNF557Q8N988 423 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CADM4Q8NFZ8 388 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 DNASE2BQ8WZ79 361 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CNTNAP3BQ96NU0 1288 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 NUSAP1Q9BXS6 441 aaKnown RBP13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 SLC6A17Q9H1V8 727 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CHMP5Q9NZZ3 219 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 APEX2Q9UBZ4 518 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CYTH4Q9UIA0 394 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CYP8B1Q9UNU6 501 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 TLR6Q9Y2C9 796 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 FRYQ5TBA9 3013 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 SPEGQ15772 3267 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 EPG5Q9HCE0 2579 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 KCNJ18B7U540 433 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 PAPSS1O43252 624 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 TSPAN3O60637 253 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 CEACAM1P13688 526 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 ENGP17813 658 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 SLC9A1P19634 815 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 PRKCHP24723 683 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 PON1P27169 355 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 CD6P30203 668 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 OXTRP30559 389 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 SGSHP51688 502 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 CAMK4Q16566 473 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 NADSYN1Q6IA69 706 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 DPY19L2P1Q6NXN4 242 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 GBP6Q6ZN66 633 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 ARMCX6Q7L4S7 300 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 AHI1Q8N157 1196 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 WDTC1Q8N5D0 677 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 FIBINQ8TAL6 211 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 DQX1Q8TE96 717 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 SHC3Q92529 594 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 GOLGA1Q92805 767 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 FOXJ1Q92949 421 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 TTC17Q96AE7 1141 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 SERPINB11Q96P15 392 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 TRIM62Q9BVG3 475 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 MIS12Q9H081 205 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 PCDHGC3Q9UN70 934 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 WASF3Q9UPY6 502 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 NAALADL1Q9UQQ1 740 aa13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 NYNRINQ9P2P1 1898 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-223ENST00000540475 GOLGA6L7A0A1B0GV03 622 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 SYNCRIPO60506 623 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 GLI1P08151 1106 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 KRT5P13647 590 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 GNA15P30679 374 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 TPMTP51580 245 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 SEMA3BQ13214 749 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 EXOC3L4Q17RC7 722 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 SYPL2Q5VXT5 272 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 CHST9Q7L1S5 443 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 PIP4P1Q86T03 277 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 OR2T3Q8NH03 318 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 WFDC5Q8TCV5 224 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 SORCS1Q8WY21 1168 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 SIPA1Q96FS4 1042 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 MYO19Q96H55 970 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 DDX50Q9BQ39 737 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 CRACR2AQ9BSW2 395 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 CIPCQ9C0C6 399 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 LHX5Q9H2C1 402 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 THAP9Q9H5L6 903 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 FBRSQ9HAH7 460 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 SIX2Q9NPC8 291 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 ACP6Q9NPH0 428 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 ABCB8Q9NUT2 735 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
SEMA4D-223ENST00000540475 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 MAP1BP46821 2468 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 ARHGAP33O14559 1287 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 NDUFS2O75306 463 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 LETM1O95202 739 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 DLDP09622 509 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 PABPC1P11940 636 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 YWHAZP63104 245 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 PDCLQ13371 301 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 MS4A13Q5J8X5 152 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 SYCP2LQ5T4T6 812 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 SH3PXD2AQ5TCZ1 1133 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 MBLAC2Q68D91 279 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 PSAPL1Q6NUJ1 521 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 RFWD3Q6PCD5 774 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 GJB7Q6PEY0 223 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 SERPINA13PQ6UXR4 307 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 DEFB119Q8N690 84 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 C1orf216Q8TAB5 229 aa13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 PRCCQ92733 491 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-223ENST00000540475 MYEOVQ96EZ4 313 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms