RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SLC44A2Q8IWA5 706 aaPredicted RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 CCAR2Q8N163 923 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 CELF5Q8N6W0 485 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 TRIML1Q8N9V2 468 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 CCDC150Q8NCX0 1101 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 OR5M3Q8NGP4 307 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 OR6Y1Q8NGX8 325 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 Q8TCH9 128 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 RAPGEF4Q8WZA2 1011 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 LRRC46Q96FV0 321 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 CLPTM1LQ96KA5 538 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 TSGA13Q96PP4 275 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 HGH1Q9BTY7 390 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 PDCL3Q9H2J4 239 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 TAF1DQ9H5J8 278 aaPredicted RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 RABEP2Q9H5N1 569 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 PANK3Q9H999 370 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 TLR9Q9NR96 1032 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 MORF4L1Q9UBU8 362 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 CLCA2Q9UQC9 943 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 MTO1Q9Y2Z2 717 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 USP15Q9Y4E8 981 aaPredicted RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 PAXBP1Q9Y5B6 917 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 HS3ST4Q9Y661 456 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 LY75O60449 1722 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 PKD1L3Q7Z443 1732 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 PAPPAQ13219 1627 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 TUBGCP6Q96RT7 1819 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 QSER1Q2KHR3 1735 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 NSD2O96028 1365 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 H3BNC9 293 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 FCHO1O14526 889 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 AKR1B10O60218 316 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 IPO13O94829 963 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 ENDOD1O94919 500 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 NPPBP16860 134 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 MSX2P35548 267 aaPredicted RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 FLT3LGP49771 235 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 STK4Q13043 487 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 PUM1Q14671 1186 aaKnown RBP eCLIP6.48□□□□□ -1.37
MRE11-209ENST00000540013 KHDC1Q4VXA5 237 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 ALKBH5Q6P6C2 394 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 UNC13DQ70J99 1090 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 PXKQ7Z7A4 578 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 CPLX4Q7Z7G2 160 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 GALNT7Q86SF2 657 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 CEP97Q8IW35 865 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 CCDC170Q8IYT3 715 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 ZNF619Q8N2I2 560 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 D2HGDHQ8N465 521 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 TMEM57Q8N5G2 664 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 VGLL2Q8N8G2 317 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 KCTD6Q8NC69 237 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 OR6B3Q8NGW1 331 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 MAML1Q92585 1016 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 TBC1D5Q92609 795 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 EDAQ92838 391 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 BORCS6Q96GS4 357 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 SNX27Q96L92 541 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 MRGPRX4Q96LA9 322 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 PIGSQ96S52 555 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 REEP2Q9BRK0 252 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 RTKNQ9BST9 563 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 ABHD16BQ9H3Z7 469 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 WDCPQ9H6R7 721 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 AGO3Q9H9G7 860 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 ERVMER34-1Q9H9K5 563 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 NOD2Q9HC29 1040 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 TDP1Q9NUW8 608 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 SEPT11Q9NVA2 429 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 TBC1D14Q9P2M4 693 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 CHORDC1Q9UHD1 332 aaPredicted RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 EIF2B4Q9UI10 523 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 PCDHA6Q9UN73 950 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 RRP15Q9Y3B9 282 aaKnown RBP6.48□□□□□ -1.37
MRE11-209ENST00000540013 NCAPD2Q15021 1401 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 PCDH11XQ9BZA7 1347 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 PCDH11YQ9BZA8 1340 aa6.48□□□□□ -1.37
MRE11-209ENST00000540013 PLOD2O00469 737 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 SRGAP2O75044 1071 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 MFAP3LO75121 409 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 GJB3O75712 270 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 ANXA1P04083 346 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 CLEC3BP05452 202 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 FTH1P19P0C7X4 201 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 BUD31P41223 144 aaPredicted RBP6.47□□□□□ -1.37
MRE11-209ENST00000540013 CARSP49589 748 aaKnown RBP6.47□□□□□ -1.37
MRE11-209ENST00000540013 GZMKP49863 264 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 GALNT2Q10471 571 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 ICAM4Q14773 271 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 RAB39AQ14964 217 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 TNIP1Q15025 636 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 TAF7Q15545 349 aaPredicted RBP6.47□□□□□ -1.37
MRE11-209ENST00000540013 SLC15A2Q16348 729 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 MST1LQ2TV78 715 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 SLC22A25Q6T423 547 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 RHOT1Q8IXI2 618 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 DIS3L2Q8IYB7 885 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms