RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 EPG5Q9HCE0 2579 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 LAMA1P25391 3075 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 CACNA1EQ15878 2313 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 BECN2A8MW95 431 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 IRAK2O43187 625 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 EPHX1P07099 455 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 PABPC1P11940 636 aaKnown RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 SLC9A1P19634 815 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 CD6P30203 668 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 SLC6A4P31645 630 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 NOVA1P51513 510 aaKnown RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 TPD52L1Q16890 204 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 ARHGAP44Q17R89 818 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 DUOXA1Q1HG43 343 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 MPP7Q5T2T1 576 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 N4BP2L1Q5TBK1 243 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 PIK3R6Q5UE93 754 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 BEND5Q7L4P6 421 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 TAC4Q86UU9 113 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 IRF2BP1Q8IU81 584 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 SCUBE3Q8IX30 993 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 ZNF557Q8N988 423 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 HJURPQ8NCD3 748 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 ZNF606Q8WXB4 792 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 AZIN2Q96A70 460 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 DDX50Q9BQ39 737 aaKnown RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 ACP6Q9NPH0 428 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 CYTH4Q9UIA0 394 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 NAALADL1Q9UQQ1 740 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 TLR6Q9Y2C9 796 aa23.08■■□□□ 1.29
SCARB1-206ENST00000539320 MUC22E2RYF6 1773 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-206ENST00000539320 CHD8Q9HCK8 2581 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 CACNA1BQ00975 2339 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 GOLGA6L7A0A1B0GV03 622 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 E5RJQ4 531 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 PAPSS1O43252 624 aaPredicted RBP23.07■■□□□ 1.28
SCARB1-206ENST00000539320 TBL1XO60907 577 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 ENGP17813 658 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 USP8P40818 1118 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 MAPK8P45983 427 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 APBA1Q02410 837 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 PDCLQ13371 301 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 FNDC3BQ53EP0 1204 aaKnown RBP23.07■■□□□ 1.28
SCARB1-206ENST00000539320 NADSYN1Q6IA69 706 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 PSAPL1Q6NUJ1 521 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 CACUL1Q86Y37 369 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 TMPRSS6Q8IU80 811 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 WFDC5Q8TCV5 224 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 CYB5D2Q8WUJ1 264 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 SHC3Q92529 594 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 PRCCQ92733 491 aaPredicted RBP23.07■■□□□ 1.28
SCARB1-206ENST00000539320 SIPA1Q96FS4 1042 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 PRICKLE1Q96MT3 831 aaPredicted RBP23.07■■□□□ 1.28
SCARB1-206ENST00000539320 CNTNAP3BQ96NU0 1288 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 CNTNAP3Q9BZ76 1288 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 SLC6A14Q9UN76 642 aa23.07■■□□□ 1.28
SCARB1-206ENST00000539320 TYW5A2RUC4 315 aaKnown RBP23.06■■□□□ 1.28
SCARB1-206ENST00000539320 CAPN9O14815 690 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 HLA-EP13747 358 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 PMLP29590 882 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 COPAP53621 1224 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 UAP1L1Q3KQV9 507 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 KIAA0907Q7Z7F0 614 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-206ENST00000539320 TMEM110Q86TL2 294 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 ADIPOR2Q86V24 386 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 MFN1Q8IWA4 741 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 FAM114A1Q8IWE2 563 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 ADAM32Q8TC27 787 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 FOXJ1Q92949 421 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 TOE1Q96GM8 510 aaKnown RBP23.06■■□□□ 1.28
SCARB1-206ENST00000539320 SLC39A13Q96H72 371 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 ZNF419Q96HQ0 510 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-206ENST00000539320 THAP9Q9H5L6 903 aa23.06■■□□□ 1.28
SCARB1-206ENST00000539320 MOCS2O96007 188 aaPredicted RBP23.05■■□□□ 1.28
SCARB1-206ENST00000539320 SERPINF2P08697 491 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 PON1P27169 355 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 CD70P32970 193 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 MAN2A1Q16706 1144 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 MBLAC2Q68D91 279 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 RGL4Q8IZJ4 473 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 OR2T3Q8NH03 318 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 NUCKS1Q9H1E3 243 aaKnown RBP23.05■■□□□ 1.28
SCARB1-206ENST00000539320 POPDC2Q9HBU9 364 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 CAPN10Q9HC96 672 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 WSB2Q9NYS7 404 aaPredicted RBP23.05■■□□□ 1.28
SCARB1-206ENST00000539320 STIM2Q9P246 746 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 PCDH15Q96QU1 1955 aa23.05■■□□□ 1.28
SCARB1-206ENST00000539320 MAP1BP46821 2468 aaKnown RBP23.04■■□□□ 1.28
SCARB1-206ENST00000539320 MEI4A8MW99 385 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 APOEP02649 317 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 DLDP09622 509 aaKnown RBP23.04■■□□□ 1.28
SCARB1-206ENST00000539320 ACADMP11310 421 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 CSRP1P21291 193 aaKnown RBP23.04■■□□□ 1.28
SCARB1-206ENST00000539320 OXTRP30559 389 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 TPMTP51580 245 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 ATXN3P54252 364 aaPredicted RBP23.04■■□□□ 1.28
SCARB1-206ENST00000539320 GFPT1Q06210 699 aaPredicted RBP23.04■■□□□ 1.28
SCARB1-206ENST00000539320 CAMK2GQ13555 558 aaPredicted RBP23.04■■□□□ 1.28
SCARB1-206ENST00000539320 DPCR1Q3MIW9 517 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 WDR45BQ5MNZ6 344 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms