RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GRIA2P42262 883 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DLG4P78352 724 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 KCNC3Q14003 757 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 NCAPHQ15003 741 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TCEAL1Q15170 157 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TOMM20Q15388 145 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MLF2Q15773 248 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MIIPQ5JXC2 388 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ALKBH5Q6P6C2 394 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SYCE2Q6PIF2 218 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 HOOK3Q86VS8 718 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ATP11CQ8NB49 1132 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 GLIS3Q8NEA6 775 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ANKK1Q8NFD2 765 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZSCAN18Q8TBC5 510 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ADAMTS19Q8TE59 1207 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SLC35F5Q8WV83 523 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TEKT4Q8WW24 435 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ATRIPQ8WXE1 791 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RFFLQ8WZ73 363 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CD101Q93033 1021 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TMA16Q96EY4 203 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RPGRIP1Q96KN7 1286 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 FAM161BQ96MY7 647 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PNKPQ96T60 521 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DNAJC7Q99615 494 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PKMYT1Q99640 499 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 C2orf49Q9BVC5 232 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 HAUS4Q9H6D7 363 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZWILCHQ9H900 591 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CTTNBP2NLQ9P2B4 639 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 AMACRQ9UHK6 382 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGAP42A6NI28 874 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 PRSS47A8MTI9 375 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 BTNL10A8MVZ5 291 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 STK25O00506 426 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SOX1O00570 391 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 HOXC11O43248 304 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ACSL4O60488 711 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 LRRN2O75325 713 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 CYP1A1P04798 512 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 MSL3P1P0C860 447 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 NCAM1P13591 858 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 BMP6P22004 513 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ACAT1P24752 427 aaKnown RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 HCAR3P49019 387 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SULT1E1P49888 294 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 CDR1P51861 262 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 PMS1P54277 932 aaKnown RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 JAM2P57087 298 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 COPS2P61201 443 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 LMNB2Q03252 620 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ADIGQ0VDE8 80 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 EIF2B5Q13144 721 aaKnown RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 HTR4Q13639 388 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ADGRE1Q14246 886 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SLC18A3Q16572 532 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SLC25A52Q3SY17 297 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 KBTBD12Q3ZCT8 623 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM31Q5JXX7 168 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 C1orf220Q5T0J3 134 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 PPP1R26Q5T8A7 1209 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 BSPRYQ5W0U4 402 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 TIGD7Q6NT04 549 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 CD300LGQ6UXG3 332 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SLC36A4Q6YBV0 504 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 KRT77Q7Z794 578 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 LUZP1Q86V48 1076 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 CHSY1Q86X52 802 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 GLYCTKQ8IVS8 523 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 NPAS3Q8IXF0 933 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 CAMKK1Q8N5S9 505 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 MAB21L3Q8N8X9 362 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 C3orf58Q8NDZ4 430 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 FEZF2Q8TBJ5 459 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 EPS8L1Q8TE68 723 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 GIPC2Q8TF65 315 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SEMA4DQ92854 862 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 FGF13Q92913 245 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF707Q96C28 371 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGEF26Q96DR7 871 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 PPP1R16AQ96I34 528 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 LRIG1Q96JA1 1093 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 C1orf74Q96LT6 269 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 ASB16Q96NS5 453 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 PGLYRP2Q96PD5 576 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 P2RY13Q9BPV8 354 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 DDX23Q9BUQ8 820 aaKnown RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 XPO4Q9C0E2 1151 aaKnown RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 OSBPL2Q9H1P3 480 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 WDCPQ9H6R7 721 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 APOBEC3GQ9HC16 384 aaKnown RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 FAM53CQ9NYF3 392 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 C6orf203Q9P0P8 240 aaPredicted RBP3.7□□□□□ -1.82
PTPN22-211ENST00000538253 SUSD2Q9UGT4 822 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 NCKAP1Q9Y2A7 1128 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 FHOD1Q9Y613 1164 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 DOCK5Q9H7D0 1870 aa3.7□□□□□ -1.82
PTPN22-211ENST00000538253 TRIP12Q14669 1992 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms