RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PAGE1O75459 146 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 CYP1A2P05177 515 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
CHFR-216ENST00000538235 CISD3P0C7P0 127 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 CHRNB1P11230 501 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 TYRP14679 529 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 PDGFRAP16234 1089 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 GALK1P51570 392 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 KPNA1P52294 538 aaPredicted RBP13.58□□□□□ -0.24
CHFR-216ENST00000538235 PRKCQQ04759 706 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 CCINQ13939 588 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 TMEM196Q5HYL7 178 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 TXNRD3NBQ6F5E7 133 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 FAM172AQ8WUF8 416 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 IGSF8Q969P0 613 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 OTUB2Q96DC9 234 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 LMLNQ96KR4 655 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 OSGEPQ9NPF4 335 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 TBC1D14Q9P2M4 693 aa13.58□□□□□ -0.24
CHFR-216ENST00000538235 NUP205Q92621 2012 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 KANSL1LA0AUZ9 987 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 FAM72CH0Y354 149 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 GPR37L1O60883 481 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 LCA5LO95447 670 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 AOC1P19801 751 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 TACR2P21452 398 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
CHFR-216ENST00000538235 NUMBP49757 651 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 ZNF143P52747 638 aaPredicted RBP13.57□□□□□ -0.24
CHFR-216ENST00000538235 PPP2R5DQ14738 602 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 UBXN2BQ14CS0 331 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 CA9Q16790 459 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 FAM72AQ5TYM5 149 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 TMEM215Q68D42 235 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 FAM72DQ6L9T8 149 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 BMP8AQ7Z5Y6 402 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.57□□□□□ -0.24
CHFR-216ENST00000538235 RALGPS2Q86X27 583 aaPredicted RBP13.57□□□□□ -0.24
CHFR-216ENST00000538235 FAM72BQ86X60 149 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 CFAP52Q8N1V2 620 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 PYROXD2Q8N2H3 581 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 ACRBPQ8NEB7 543 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 FAM3CQ92520 227 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 PANX2Q96RD6 677 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 TRIM62Q9BVG3 475 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 BBS2Q9BXC9 721 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 TKTL2Q9H0I9 626 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 GPATCH2LQ9NWQ4 482 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 ZNF212Q9UDV6 495 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 SALL4Q9UJQ4 1053 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 STAP1Q9ULZ2 295 aa13.57□□□□□ -0.24
CHFR-216ENST00000538235 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 K7EQS6 105 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 SLC9A3R1O14745 358 aaPredicted RBP13.56□□□□□ -0.24
CHFR-216ENST00000538235 LATS1O95835 1130 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 IL1R2P27930 398 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 SDC4P31431 198 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
CHFR-216ENST00000538235 MLLT6P55198 1093 aaPredicted RBP13.56□□□□□ -0.24
CHFR-216ENST00000538235 SNX16P57768 344 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 GEN1Q17RS7 908 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 ANO4Q32M45 955 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 ALFQ53S48 1182 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 FSCBQ5H9T9 825 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 ADGRF1Q5T601 910 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 MANEALQ5VSG8 457 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 FBXL22Q6P050 247 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 STRADAQ7RTN6 431 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 LGI2Q8N0V4 545 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 FBXL6Q8N531 539 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 AZIN2Q96A70 460 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 PBXIP1Q96AQ6 731 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 P2RY13Q9BPV8 354 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 DCLK3Q9C098 648 aa13.56□□□□□ -0.24
CHFR-216ENST00000538235 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
CHFR-216ENST00000538235 ANKRD62A6NC57 917 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 FAM170BA6NMN3 283 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 AKR1B10O60218 316 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 LRCH4O75427 683 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 CNTN5O94779 1100 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 ADH1CP00326 375 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 APOEP02649 317 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 TPM1P09493 284 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 HNRNPLP14866 589 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHFR-216ENST00000538235 HLA-FP30511 346 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 CCR1P32246 355 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 GAD2Q05329 585 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 AUHQ13825 339 aaKnown RBP13.55□□□□□ -0.24
CHFR-216ENST00000538235 EMC10Q5UCC4 262 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 CHSY1Q86X52 802 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 CD101Q93033 1021 aa13.55□□□□□ -0.24
CHFR-216ENST00000538235 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms