RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 TSNQ15631 228 aaKnown RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 FIGNQ5HY92 759 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ZNF484Q5JVG2 852 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CDC42EP5Q6NZY7 148 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ATG9AQ7Z3C6 839 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 FBXO25Q8TCJ0 367 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ACTRT1Q8TDG2 376 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ZBTB10Q96DT7 871 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CATSPER2Q96P56 530 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 SH3BP4Q9P0V3 963 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 VTI1BQ9UEU0 232 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ERI2A8K979 691 aaKnown RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 GRK4P32298 578 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CD151P48509 253 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 IRAK1BP1Q5VVH5 260 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 NAIF1Q69YI7 327 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CBWD2Q8IUF1 395 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 RNASE11Q8TAA1 199 aaKnown RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CYP3A43Q9HB55 503 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CNTNAP5Q8WYK1 1306 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 BCLAF3A2AJT9 711 aaKnown RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 C2CD2LO14523 706 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 BIRC5O15392 142 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 MPOP05164 745 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ANXA6P08133 673 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CYP11B1P15538 503 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 PON1P27169 355 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 NAMPTP43490 491 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 WASHC2DQ5SRD0 308 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 SPOCD1Q6ZMY3 1216 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CLEC10AQ8IUN9 316 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 CENPIQ92674 756 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 NACC2Q96BF6 587 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 APOL2Q9BQE5 337 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 RXFP1Q9HBX9 757 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 C1orf232A0A0U1RR37 186 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 MAP3K6O95382 1288 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 SGPL1O95470 568 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 SERPINE1P05121 402 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 SERPINF2P08697 491 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 MSH3P20585 1137 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 TKTP29401 623 aaKnown RBP10.89□□□□□ -0.67
CLIP1-209ENST00000537178 IFNGR2P38484 337 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 AMPD2Q01433 879 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 STARD3Q14849 445 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 TIMM50Q3ZCQ8 353 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 MPZL3Q6UWV2 235 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 RIPOR1Q6ZS17 1223 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 DHFR2Q86XF0 187 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 UGT2B28Q9BY64 529 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 OSGEPL1Q9H4B0 414 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
CLIP1-209ENST00000537178 FAM237AA0A1B0GTK4 181 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 TNNI3P19429 210 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 CYP2A7P20853 494 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 STAT5AP42229 794 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 ZFP1Q6P2D0 407 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 KIAA0408Q6ZU52 694 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 CARNMT1Q8N4J0 409 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 SEPHS2Q99611 448 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 ZCCHC2Q9C0B9 1178 aaKnown RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 PAIP1Q9H074 479 aaKnown RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 MYLK2Q9H1R3 596 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 ADPRHL2Q9NX46 363 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 SHOC2Q9UQ13 582 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 NDUFAF1Q9Y375 327 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 MROH7Q68CQ1 1323 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 CCL15-CCL14A0A0B4J2E2 113 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 A0A0G2JLW4 131 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 SLC12A8A0AV02 714 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 CYB561D2O14569 222 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 UBOX5O94941 541 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 BGNP21810 368 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 PTPN3P26045 913 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 PBLDP30039 288 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 GNA13Q14344 377 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 CCL15Q16663 113 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 DGUOKQ16854 277 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 GLRA4Q5JXX5 417 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 OTUD3Q5T2D3 398 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 FAM131BQ86XD5 332 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 TRAPPC9Q96Q05 1148 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 C6orf62Q9GZU0 229 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 KLK14Q9P0G3 267 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 USP18Q9UMW8 372 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 RAD51BO15315 384 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 INPP4BO15327 924 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 SYNCRIPO60506 623 aaKnown RBP10.88□□□□□ -0.67
CLIP1-209ENST00000537178 MFN2O95140 757 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 TNFAIP8O95379 198 aa10.88□□□□□ -0.67
CLIP1-209ENST00000537178 NFICP08651 508 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms