RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 EME2A4GXA9 379 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-208ENST00000537047 RFPL3SP0C7P2 107 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 AKR1A1P14550 325 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 RHCEP18577 417 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 MATN1P21941 496 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 MST1P26927 711 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 RAP1GAP2Q684P5 730 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 CYB5RLQ6IPT4 315 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 C16orf89Q6UX73 402 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 TRILQ7L0X0 811 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 TRAPPC11Q7Z392 1133 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 SPATA2LQ8IUW3 424 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-208ENST00000537047 DDIASQ8IXT1 998 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 CLASRPQ8N2M8 674 aaKnown RBP5.86□□□□□ -1.47
CCDC7-208ENST00000537047 ZBTB8BQ8NAP8 495 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-208ENST00000537047 NTPCRQ9BSD7 190 aaKnown RBP5.86□□□□□ -1.47
CCDC7-208ENST00000537047 ZBTB26Q9HCK0 441 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 IPO11Q9UI26 975 aaKnown RBP5.86□□□□□ -1.47
CCDC7-208ENST00000537047 B3GNT3Q9Y2A9 372 aa5.86□□□□□ -1.47
CCDC7-208ENST00000537047 SPTLC2O15270 562 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 COQ9O75208 318 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 SLC8A1P32418 973 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 DAG1Q14118 895 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 FAXCQ5TGI0 409 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 HMBOX1Q6NT76 420 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 CCDC144NLQ6NUI1 221 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 PIK3AP1Q6ZUJ8 805 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 GPSM1Q86YR5 675 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 LAS2Q8IYD9 372 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 ZFPM2Q8WW38 1151 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 ATP2A3Q93084 1043 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 IQCDQ96DY2 449 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 MED30Q96HR3 178 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
CCDC7-208ENST00000537047 ZSCAN9O15535 394 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 THAP12O43422 761 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 CCNT2O60583 730 aaKnown RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 ACAA1P09110 424 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 LTBQ06643 244 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 GBX1Q14549 363 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 CAPRIN2Q6IMN6 1127 aaKnown RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 KIAA0408Q6ZU52 694 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 CTU1Q7Z7A3 348 aaKnown RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 FAM177A1Q8N128 213 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 IQCF1Q8N6M8 205 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 LPAR1Q92633 364 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 PHKBQ93100 1093 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 FAM84BQ96KN1 310 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 MEIS3Q99687 375 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 WDR83Q9BRX9 315 aaKnown RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 TRIM2Q9C040 744 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 UNKQ9C0B0 810 aaKnown RBP5.84□□□□□ -1.47
CCDC7-208ENST00000537047 BTBD1Q9H0C5 482 aa5.84□□□□□ -1.47
CCDC7-208ENST00000537047 KAT7O95251 611 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 MT3P25713 68 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 CIITAP33076 1130 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 NFATC4Q14934 902 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 ARHGAP15Q53QZ3 475 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.83□□□□□ -1.48
CCDC7-208ENST00000537047 KIAA1755Q5JYT7 1200 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-208ENST00000537047 KAT2AQ92830 837 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 ZNF347Q96SE7 839 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 TMOD4Q9NZQ9 345 aa5.83□□□□□ -1.48
CCDC7-208ENST00000537047 ZMYND8Q9ULU4 1186 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-208ENST00000537047 ZNF335Q9H4Z2 1342 aaPredicted RBP5.82□□□□□ -1.48
CCDC7-208ENST00000537047 RHODO00212 210 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 TSPAN6O43657 245 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 KRT86O43790 486 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 PECAM1P16284 738 aaPredicted RBP5.82□□□□□ -1.48
CCDC7-208ENST00000537047 MMP8P22894 467 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 MLH1P40692 756 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 PIK3CBP42338 1070 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 KRT81Q14533 505 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 P3H1Q32P28 736 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 INO80DQ53TQ3 878 aaPredicted RBP5.82□□□□□ -1.48
CCDC7-208ENST00000537047 NR2C2APQ86WQ0 139 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 ATP11CQ8NB49 1132 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 JDP2Q8WYK2 163 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 TSR2Q969E8 191 aaKnown RBP5.82□□□□□ -1.48
CCDC7-208ENST00000537047 HTATIP2Q9BUP3 242 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 MAP6D1Q9H9H5 199 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 PNPLA8Q9NP80 782 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 SPAG4Q9NPE6 437 aa5.82□□□□□ -1.48
CCDC7-208ENST00000537047 RPS10-NUDT3A0A1W2PQS6 291 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 KCNQ3O43525 872 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 GSTM5P46439 218 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 SLC4A8Q2Y0W8 1093 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 KRTAP27-1Q3LI81 207 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 MRNIPQ6NTE8 343 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 C14orf80Q86SX3 495 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 RBM23Q86U06 439 aaKnown RBP5.81□□□□□ -1.48
CCDC7-208ENST00000537047 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 OVCA2Q8WZ82 227 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 TIFAQ96CG3 184 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 SF3B5Q9BWJ5 86 aaKnown RBP5.81□□□□□ -1.48
CCDC7-208ENST00000537047 PCDHAC1Q9H158 963 aa5.81□□□□□ -1.48
CCDC7-208ENST00000537047 RXFP3Q9NSD7 469 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms