RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-202ENST00000535685 STPG1Q5TH74 334 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 NUGGCQ68CJ6 796 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 CYP2U1Q7Z449 544 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 ANKS1BQ7Z6G8 1248 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 TMEM110Q86TL2 294 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 UNC45BQ8IWX7 931 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC60-202ENST00000535685 WFIKKN2Q8TEU8 576 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 ZNF606Q8WXB4 792 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 RLN3Q8WXF3 142 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 GLMNQ92990 594 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 TRIM62Q9BVG3 475 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 CLSTN2Q9H4D0 955 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 UBE2TQ9NPD8 197 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-202ENST00000535685 ZDHHC4Q9NPG8 344 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 RXFP3Q9NSD7 469 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 ELOVL2Q9NXB9 296 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 SFMBT1Q9UHJ3 866 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 INVSQ9Y283 1065 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 STON1Q9Y6Q2 735 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 ADAMTS9Q9P2N4 1935 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 MUC22E2RYF6 1773 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-202ENST00000535685 IGHV1OR15-9A0A0B4J2B8 117 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 KHNYNO15037 678 aaKnown RBP11.24□□□□□ -0.61
CCDC60-202ENST00000535685 AP5Z1O43299 807 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 MED7O43513 233 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 FYNP06241 537 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 ADRB1P08588 477 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 ERCC5P28715 1186 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-202ENST00000535685 RGS7P49802 495 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 CCDC6Q16204 474 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 CAMK4Q16566 473 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 IL31Q6EBC2 164 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 KIAA1211LQ6NV74 962 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 SYT12Q8IV01 421 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 ZNF557Q8N988 423 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-202ENST00000535685 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 SHC3Q92529 594 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 EDEM1Q92611 657 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 TMA16Q96EY4 203 aaKnown RBP11.24□□□□□ -0.61
CCDC60-202ENST00000535685 SLC39A13Q96H72 371 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 MRGPRX1Q96LB2 322 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 LSM14BQ9BX40 385 aaKnown RBP11.24□□□□□ -0.61
CCDC60-202ENST00000535685 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 CALCOCO1Q9P1Z2 691 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 APEX2Q9UBZ4 518 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 CLEC4EQ9ULY5 219 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 PCDH15Q96QU1 1955 aa11.24□□□□□ -0.61
CCDC60-202ENST00000535685 CEP295Q9C0D2 2601 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 LNP1A1A4G5 178 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 BECN2A8MW95 431 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 ACSL4O60488 711 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 IGLV3-19P01714 112 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 NCAM1P13591 858 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 PON1P27169 355 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 WASP42768 502 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 SLC11A2P49281 568 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 DHPSP49366 369 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-202ENST00000535685 EIF4EBP2Q13542 120 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-202ENST00000535685 STARD3Q14849 445 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 PIK3R6Q5UE93 754 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 TMEM215Q68D42 235 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 FAM114A1Q8IWE2 563 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 PGBD3Q8N328 593 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 CEP76Q8TAP6 659 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 GOLGA1Q92805 767 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 BHMTQ93088 406 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 ZNF419Q96HQ0 510 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-202ENST00000535685 SERPINB11Q96P15 392 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 DDX50Q9BQ39 737 aaKnown RBP11.23□□□□□ -0.61
CCDC60-202ENST00000535685 EDEM2Q9BV94 578 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 CACNA2D2Q9NY47 1150 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 USP36Q9P275 1121 aaKnown RBP11.23□□□□□ -0.61
CCDC60-202ENST00000535685 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 TLR6Q9Y2C9 796 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
CCDC60-202ENST00000535685 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 WASH3PC4AMC7 463 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 CDX4O14627 284 aaPredicted RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 IGLV3-25P01717 112 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 GLI1P08151 1106 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 KRT5P13647 590 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 SLC9A1P19634 815 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 HLA-FP30511 346 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 GNA15P30679 374 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 IL12RB1P42701 662 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 PTGER3P43115 390 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 TBX4P57082 545 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 LMAN2Q12907 356 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 ZNF234Q14588 700 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 MAN2A1Q16706 1144 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 FUT11Q495W5 492 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms