RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 USP33Q8TEY7 942 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 RXFP2Q8WXD0 754 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 RNF34Q969K3 372 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 VCPIP1Q96JH7 1222 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 PRICKLE1Q96MT3 831 aaPredicted RBP23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 DDX50Q9BQ39 737 aaKnown RBP23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 SELENOOQ9BVL4 669 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 TRIM5Q9C035 493 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 CACNA1IQ9P0X4 2223 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 TBC1D3BA6NDS4 549 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 SIGLEC16A6NMB1 481 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 H0Y858 1186 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 F9P00740 461 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 RRM1P23921 792 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 TNFRSF4P43489 277 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 CCR3P51677 355 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 ATXN1P54253 815 aaKnown RBP23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 SEC13P55735 322 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 SATB1Q01826 763 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 DEUP1Q05D60 604 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 ARID5BQ14865 1188 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 CCDC14Q49A88 953 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 MS4A13Q5J8X5 152 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 PPP1R15BQ5SWA1 713 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 DNAJC24Q6P3W2 148 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 RPLP0P6Q8NHW5 317 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 DNAJC7Q99615 494 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 PRMT1Q99873 361 aaKnown RBP23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 ANLNQ9NQW6 1124 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 SLC12A6Q9UHW9 1150 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 FBXO4Q9UKT5 387 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 SLC27A6Q9Y2P4 619 aa23.56■■□□□ 1.36
SFSWAP-204ENST00000535399 ENDOD1O94919 500 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 ADCY5O95622 1261 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 FTLP02792 175 aaPredicted RBP23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 PDGFRAP16234 1089 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 ABCB4P21439 1286 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 RFC1P35251 1148 aaPredicted RBP23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 KIR2DL1P43626 348 aaPredicted RBP23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 CXCL12P48061 93 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 BRMS1LQ5PSV4 323 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 MPP7Q5T2T1 576 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 EMC10Q5UCC4 262 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 RAP1GAP2Q684P5 730 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 CHSY1Q86X52 802 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 OR8K1Q8NGG5 319 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 CCDC26Q8TAB7 109 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 SLC2A11Q9BYW1 496 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 TMEM51Q9NW97 253 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 ARHGEF38Q9NXL2 777 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 ARHGAP20Q9P2F6 1191 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 ADAMTS1Q9UHI8 967 aa23.55■■□□□ 1.36
SFSWAP-204ENST00000535399 I6L893 689 aaPredicted RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 TBL1XO60907 577 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 RTN2O75298 545 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 PAPSS2O95340 614 aaPredicted RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 SP9P0CG40 484 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 TDGF1P13385 188 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 TACR2P21452 398 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 SDC4P31431 198 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 RDXP35241 583 aaKnown RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 RPS24P62847 133 aaKnown RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 MRPS21P82921 87 aaKnown RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 TBX2Q13207 712 aaPredicted RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 MTA1Q13330 715 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 C10orf76Q5T2E6 689 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 WDR59Q6PJI9 974 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 DRC7Q8IY82 874 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 LGI2Q8N0V4 545 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 ISCUQ9H1K1 167 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 WDCPQ9H6R7 721 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 POLR3BQ9NW08 1133 aaPredicted RBP23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 HCN2Q9UL51 889 aa23.54■■□□□ 1.36
SFSWAP-204ENST00000535399 PRRT4C9JH25 899 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 MFAP3LO75121 409 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 ATG13O75143 517 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 PTPN9P43378 593 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 ATP11AP98196 1134 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 CSTF1Q05048 431 aaKnown RBP23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 GEN1Q17RS7 908 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 C15orf59Q2T9L4 293 aaPredicted RBP23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 RAB6CQ53S08 254 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 C2orf27AQ580R0 203 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 PLEKHA7Q6IQ23 1121 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 TSSK4Q6SA08 328 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 SND1Q7KZF4 910 aaKnown RBP eCLIP23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 HJURPQ8NCD3 748 aaPredicted RBP23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 CENPIQ92674 756 aaPredicted RBP23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 TKTL2Q9H0I9 626 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 RAB6CQ9H0N0 254 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 STARD13Q9Y3M8 1113 aa23.53■■□□□ 1.36
SFSWAP-204ENST00000535399 K7ESF4 209 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 PAGE1O75459 146 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 TPM1P09493 284 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 GPD1P21695 349 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 TIE1P35590 1138 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 ZNF75DP51815 510 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 RPL7AP62424 266 aaKnown RBP23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 MAMLD1Q13495 774 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms