RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 SERPINB11Q96P15 392 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 DDX50Q9BQ39 737 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 CRACR2AQ9BSW2 395 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 TRIM62Q9BVG3 475 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 GTPBP2Q9BX10 602 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 ITM2CQ9NQX7 267 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 ABCB8Q9NUT2 735 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 USP36Q9P275 1121 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 SUSD2Q9UGT4 822 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 TYW5A2RUC4 315 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 GIPC1O14908 333 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 ACSL4O60488 711 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 TBL1XO60907 577 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 PABPC1P11940 636 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 CEACAM1P13688 526 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 GNSP15586 552 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 GNA15P30679 374 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 RPL34P49207 117 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 CACNA1BQ00975 2339 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 MEA1Q16626 185 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 PIK3R6Q5UE93 754 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 DENND1BQ6P3S1 775 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 RFWD3Q6PCD5 774 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 HDDC3Q8N4P3 179 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 ZNF557Q8N988 423 aaPredicted RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 DQX1Q8TE96 717 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 CEP192Q8TEP8 1941 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 STK32AQ8WU08 396 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 ZNF606Q8WXB4 792 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 AZIN2Q96A70 460 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 TOE1Q96GM8 510 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 CEP295Q9C0D2 2601 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 CAPN10Q9HC96 672 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 GGA2Q9UJY4 613 aa16.83■□□□□ 0.28
CLSTN3-204ENST00000535313 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 GOLGA6L7A0A1B0GV03 622 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 MEI4A8MW99 385 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 CAPN9O14815 690 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 THAP12O43422 761 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 ATP5BP06576 529 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 SYPP08247 313 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 USP8P40818 1118 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 TPMTP51580 245 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 SGSHP51688 502 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 SHC2P98077 582 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 ZNF252P-AS1Q0IIN9 211 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 NNTQ13423 1086 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 FAM133BQ5BKY9 247 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 GBP6Q6ZN66 633 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 ADIPOR2Q86V24 386 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 CCDC117Q8IWD4 279 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 HJURPQ8NCD3 748 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 OR2T3Q8NH03 318 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 CYB5D2Q8WUJ1 264 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 MED15Q96RN5 788 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 GPR174Q9BXC1 333 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 SLC32A1Q9H598 525 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 FSCN3Q9NQT6 498 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 WSB2Q9NYS7 404 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 NAALADL1Q9UQQ1 740 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 TLR6Q9Y2C9 796 aa16.82■□□□□ 0.28
CLSTN3-204ENST00000535313 ARHGAP33O14559 1287 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 OPHN1O60890 802 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 FYNP06241 537 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 HLA-EP13747 358 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 POLR2EP19388 210 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 SLC6A4P31645 630 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 COPAP53621 1224 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 PLEKHG6Q3KR16 790 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 MBLAC2Q68D91 279 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 BEND5Q7L4P6 421 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 CACUL1Q86Y37 369 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 MFN1Q8IWA4 741 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 MLKLQ8NB16 471 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 DEFB124Q8NES8 71 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 CADM4Q8NFZ8 388 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 ADAM32Q8TC27 787 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 FCRL2Q96LA5 508 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 NUP58Q9BVL2 599 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 SLC4A5Q9BY07 1137 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 TMEM245Q9H330 911 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 CHMP5Q9NZZ3 219 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 STIM2Q9P246 746 aa16.81■□□□□ 0.28
CLSTN3-204ENST00000535313 MAP1BP46821 2468 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 KCNJ18B7U540 433 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 E5RJQ4 531 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 APOEP02649 317 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 DLDP09622 509 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 SLC9A1P19634 815 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 MAOBP27338 520 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 CD70P32970 193 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 MTIF2P46199 727 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 CAMK2GQ13555 558 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 ARHGAP44Q17R89 818 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 EXOC3L4Q17RC7 722 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms