RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 FYB2Q5VWT5 728 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 ASTLQ6HA08 431 aaPredicted RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 H2AFVQ71UI9 128 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 C12orf40Q86WS4 652 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 FAM131BQ86XD5 332 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 ETFBKMTQ8IXQ9 262 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 CCDC170Q8IYT3 715 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 FNIP1Q8TF40 1166 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 DDI1Q8WTU0 396 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 CTNNBL1Q8WYA6 563 aaPredicted RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 CENPIQ92674 756 aaPredicted RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 XPO6Q96QU8 1125 aaKnown RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 OSBPL6Q9BZF3 934 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 IRX2Q9BZI1 471 aaPredicted RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 TKTL2Q9H0I9 626 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 GOLGA6L7A0A1B0GV03 622 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 TMEM191CA6NGB0 347 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 TSPAN3O60637 253 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 CYLC1P35663 651 aaPredicted RBP25.06■■□□□ 1.6
SIPA1-210ENST00000534406 CLCN5P51795 746 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 OGDHQ02218 1023 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 GRSF1Q12849 480 aaKnown RBP eCLIP25.06■■□□□ 1.6
SIPA1-210ENST00000534406 SH3PXD2AQ5TCZ1 1133 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 RAP1GAP2Q684P5 730 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 RFWD3Q6PCD5 774 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 TMTC1Q8IUR5 882 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 CCDC105Q8IYK2 499 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 ARHGEF26Q96DR7 871 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 PACSIN1Q9BY11 444 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 PLK2Q9NYY3 685 aa25.06■■□□□ 1.6
SIPA1-210ENST00000534406 TYW5A2RUC4 315 aaKnown RBP25.05■■□□□ 1.6
SIPA1-210ENST00000534406 FAM170BA6NMN3 283 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 F5H5T6 163 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 AOC1P19801 751 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 TACR2P21452 398 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 PSMA2P25787 234 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 HDAC4P56524 1084 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 GSDMDP57764 484 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 TMEM196Q5HYL7 178 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 MS4A13Q5J8X5 152 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 PIK3R6Q5UE93 754 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 NAT16Q8N8M0 369 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 HJURPQ8NCD3 748 aaPredicted RBP25.05■■□□□ 1.6
SIPA1-210ENST00000534406 PRICKLE1Q96MT3 831 aaPredicted RBP25.05■■□□□ 1.6
SIPA1-210ENST00000534406 NUP85Q9BW27 656 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 TRIM7Q9C029 511 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 DNAJC17Q9NVM6 304 aaKnown RBP25.05■■□□□ 1.6
SIPA1-210ENST00000534406 SIT1Q9Y3P8 196 aa25.05■■□□□ 1.6
SIPA1-210ENST00000534406 MTF2Q9Y483 593 aaPredicted RBP25.05■■□□□ 1.6
SIPA1-210ENST00000534406 NCAM2O15394 837 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 TULP3O75386 442 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 PAGE1O75459 146 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 TMEM253P0C7T8 217 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 GALK1P51570 392 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 KDSRQ06136 332 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 LRRC32Q14392 662 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 RAB6CQ53S08 254 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 FSTL4Q6MZW2 842 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 LGI2Q8N0V4 545 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 ZNF687Q8N1G0 1237 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 TMA16Q96EY4 203 aaKnown RBP25.04■■□□□ 1.6
SIPA1-210ENST00000534406 P2RY11Q96G91 374 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 PNKPQ96T60 521 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 RAB6CQ9H0N0 254 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 ARHGEF4Q9NR80 690 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 DEC1Q9P2X7 70 aa25.04■■□□□ 1.6
SIPA1-210ENST00000534406 SOWAHDA6NJG2 315 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 DRD1P21728 446 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 HOXD9P28356 352 aaPredicted RBP25.03■■□□□ 1.6
SIPA1-210ENST00000534406 SLC6A11P48066 632 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 MRE11P49959 708 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 SGSHP51688 502 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 ZNF252P-AS1Q0IIN9 211 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 ARL13BQ3SXY8 428 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 PREPLQ4J6C6 727 aaPredicted RBP25.03■■□□□ 1.6
SIPA1-210ENST00000534406 C10orf76Q5T2E6 689 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 MPP7Q5T2T1 576 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 ACBD5Q5T8D3 534 aaPredicted RBP25.03■■□□□ 1.6
SIPA1-210ENST00000534406 GRAMD4Q6IC98 578 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 ZNF564Q8TBZ8 553 aaPredicted RBP25.03■■□□□ 1.6
SIPA1-210ENST00000534406 PRMT1Q99873 361 aaKnown RBP25.03■■□□□ 1.6
SIPA1-210ENST00000534406 BAG1Q99933 345 aaPredicted RBP25.03■■□□□ 1.6
SIPA1-210ENST00000534406 ANLNQ9NQW6 1124 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 UVRAGQ9P2Y5 699 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 ANAPC7Q9UJX3 599 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 HS3ST4Q9Y661 456 aa25.03■■□□□ 1.6
SIPA1-210ENST00000534406 KMT2EQ8IZD2 1858 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 I6L893 689 aaPredicted RBP25.02■■□□□ 1.6
SIPA1-210ENST00000534406 TBL1XO60907 577 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 LCA5LO95447 670 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 APODP05090 189 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 CCINQ13939 588 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 SPA17Q15506 151 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 DGKKQ5KSL6 1271 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 RABGAP1LQ5R372 815 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 TTC39BQ5VTQ0 682 aaPredicted RBP25.02■■□□□ 1.6
SIPA1-210ENST00000534406 CTTNBP2NLQ9P2B4 639 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 INTUQ9ULD6 942 aa25.02■■□□□ 1.6
SIPA1-210ENST00000534406 IPO7O95373 1038 aaKnown RBP25.01■■□□□ 1.59
SIPA1-210ENST00000534406 EGFP01133 1207 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms