RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 OR52K1Q8NGK4 314 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 APBA2Q99767 749 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 LPIN3Q9BQK8 851 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 OSBPL7Q9BZF2 842 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 SH3BP1Q9Y3L3 701 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 PPME1Q9Y570 386 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 ALOX15BO15296 676 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 SHOX2O60902 331 aaPredicted RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 ENTPD5O75356 428 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 FAM155BO75949 473 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 PDE5AO76074 875 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 SMPD1P17405 629 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 TFE3P19532 575 aaPredicted RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 PPTC7Q8NI37 304 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 ABTB1Q969K4 478 aaPredicted RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 PHF21BQ96EK2 531 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 TEPSINQ96N21 525 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 ELOVL4Q9GZR5 314 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 NRDE2Q9H7Z3 1164 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 DCLRE1BQ9H816 532 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 LSM7Q9UK45 103 aaKnown RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 A0A096LPK6 155 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 DNM1LO00429 736 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 ANGPT2O15123 496 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 ANXA9O76027 345 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 MMP3P08254 477 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 CCR1P32246 355 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 BTKQ06187 659 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 RAD51Q06609 339 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 TXNRD3NBQ6F5E7 133 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAD50-209ENST00000533482 SZRD1Q7Z422 152 aa12.74□□□□□ -0.37
RAD50-209ENST00000533482 OXNAD1Q96HP4 312 aaPredicted RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 UTP6Q9NYH9 597 aaKnown RBP12.74□□□□□ -0.37
RAD50-209ENST00000533482 SMIM28A0A1B0GU29 152 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 NCF1BA6NI72 391 aaPredicted RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 NCF1CA8MVU1 366 aaPredicted RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 PFDN1O60925 122 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 NCF1P14598 390 aaPredicted RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 ZNF280DQ6N043 979 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 ATP6V0D2Q8N8Y2 350 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SMARCD1Q96GM5 515 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 DMAP1Q9NPF5 467 aaPredicted RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 IL1RAPL1Q9NZN1 696 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 ACOT9Q9Y305 439 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 ATP6V1B1P15313 513 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 STMN1P16949 149 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 AKT1P31749 480 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 GP5P40197 560 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 GBE1Q04446 702 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 BST1Q10588 318 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 FLOT2Q14254 428 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SNX17Q15036 470 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SGO1Q5FBB7 561 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 YTHDF3Q7Z739 585 aaKnown RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 DEFB107AQ8IZN7 70 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 ERLEC1Q96DZ1 483 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 ZBTB18Q99592 522 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 TBC1D10AQ9BXI6 508 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 POPDC2Q9HBU9 364 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 C2orf71A6NGG8 1288 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SUPT3HB4E1H0 165 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 AKAP10O43572 662 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 DCXO43602 365 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SUPT3HO75486 399 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 VNN1O95497 513 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 CYBBP04839 570 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 NPR3P17342 541 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SERPINB8P50452 374 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 CCL14Q16627 93 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 FAM110CQ1W6H9 321 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 CYP4X1Q8N118 509 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 USP13Q92995 863 aaPredicted RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 NIFKQ9BYG3 293 aaKnown RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 EML4Q9HC35 981 aaKnown RBP12.73□□□□□ -0.37
RAD50-209ENST00000533482 PTPRHQ9HD43 1115 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 ARHGAP26Q9UNA1 814 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 SLC27A5Q9Y2P5 690 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 COQ4Q9Y3A0 265 aa12.73□□□□□ -0.37
RAD50-209ENST00000533482 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.72□□□□□ -0.37
RAD50-209ENST00000533482 F5H5T6 163 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 TIMM44O43615 452 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 FBXO21O94952 628 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 KRT16P08779 473 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 OR4Q2P0C623 313 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 SLC1A6P48664 564 aa12.72□□□□□ -0.37
RAD50-209ENST00000533482 ZNF177Q13360 481 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms