RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 IGLV3-25P01717 112 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 ERBB2P04626 1255 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 CYBBP04839 570 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 NUMBP49757 651 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 RPL6Q02878 288 aaKnown RBP18.51■□□□□ 0.55
SMG1-203ENST00000532700 RING1Q06587 406 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 VWA3BQ502W6 1294 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 LPCAT2Q7L5N7 544 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 ENOSF1Q7L5Y1 443 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 CFAP52Q8N1V2 620 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 C1orf131Q8NDD1 294 aaKnown RBP18.51■□□□□ 0.55
SMG1-203ENST00000532700 TMA16Q96EY4 203 aaKnown RBP18.51■□□□□ 0.55
SMG1-203ENST00000532700 TUBGCP2Q9BSJ2 902 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 SLC2A11Q9BYW1 496 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 NDST4Q9H3R1 872 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 STIM2Q9P246 746 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 INTS6Q9UL03 887 aaKnown RBP18.51■□□□□ 0.55
SMG1-203ENST00000532700 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
SMG1-203ENST00000532700 C4orf47A7E2U8 309 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 GRAP2O75791 330 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 MOCS2O96007 188 aaPredicted RBP18.5■□□□□ 0.55
SMG1-203ENST00000532700 SDHBP21912 280 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 KCNA4P22459 653 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 KLK7P49862 253 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 EIF4EBP2Q13542 120 aaPredicted RBP18.5■□□□□ 0.55
SMG1-203ENST00000532700 MEA1Q16626 185 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 TPD52L1Q16890 204 aaPredicted RBP18.5■□□□□ 0.55
SMG1-203ENST00000532700 ZC3H12AQ5D1E8 599 aaKnown RBP18.5■□□□□ 0.55
SMG1-203ENST00000532700 FSCBQ5H9T9 825 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 OTUD1Q5VV17 481 aaPredicted RBP18.5■□□□□ 0.55
SMG1-203ENST00000532700 SDE2Q6IQ49 451 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 FAM183BPQ6ZVS7 135 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 CHST9Q7L1S5 443 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 C11orf74Q86VG3 221 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMG1-203ENST00000532700 STK32AQ8WU08 396 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 GGA2Q9UJY4 613 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 PILRBQ9UKJ0 227 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 TLR6Q9Y2C9 796 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 PI4KAP42356 2102 aa18.5■□□□□ 0.55
SMG1-203ENST00000532700 GIPC1O14908 333 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 IRAK2O43187 625 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 MED7O43513 233 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 PABPC1P11940 636 aaKnown RBP18.49■□□□□ 0.55
SMG1-203ENST00000532700 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
SMG1-203ENST00000532700 ERCC5P28715 1186 aaPredicted RBP18.49■□□□□ 0.55
SMG1-203ENST00000532700 IRAK1P51617 712 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 KCNJ12Q14500 433 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 PTPN20Q4JDL3 420 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 TRIM61Q5EBN2 209 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 PEAR1Q5VY43 1037 aaPredicted RBP18.49■□□□□ 0.55
SMG1-203ENST00000532700 LYSMD4Q5XG99 296 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 C11orf57Q6ZUT1 292 aaPredicted RBP18.49■□□□□ 0.55
SMG1-203ENST00000532700 OR2I1PQ8NGU4 316 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 MYO19Q96H55 970 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 HSPA12BQ96MM6 686 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 TMEM245Q9H330 911 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 TAB2Q9NYJ8 693 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 USP36Q9P275 1121 aaKnown RBP18.49■□□□□ 0.55
SMG1-203ENST00000532700 PCDHGC3Q9UN70 934 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 SLCO1B1Q9Y6L6 691 aa18.49■□□□□ 0.55
SMG1-203ENST00000532700 GON4LQ3T8J9 2241 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 TRUB2O95900 331 aaKnown RBP18.48■□□□□ 0.55
SMG1-203ENST00000532700 EPHX1P07099 455 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 TFE3P19532 575 aaPredicted RBP18.48■□□□□ 0.55
SMG1-203ENST00000532700 ACADSBP45954 432 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 LMAN2Q12907 356 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 NUMA1Q14980 2115 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 EIF4HQ15056 248 aaKnown RBP18.48■□□□□ 0.55
SMG1-203ENST00000532700 MS4A13Q5J8X5 152 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 NUGGCQ68CJ6 796 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 MBLAC2Q68D91 279 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 OLFML1Q6UWY5 402 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 CIR1Q86X95 450 aaPredicted RBP18.48■□□□□ 0.55
SMG1-203ENST00000532700 FAM71AQ8IYT1 594 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 DEFB106AQ8N104 65 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 SERPINB11Q96P15 392 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 NAA15Q9BXJ9 866 aaKnown RBP18.48■□□□□ 0.55
SMG1-203ENST00000532700 PRDM16Q9HAZ2 1276 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 DACH1Q9UI36 760 aa18.48■□□□□ 0.55
SMG1-203ENST00000532700 KHNYNO15037 678 aaKnown RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 EPHB6O15197 1021 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 FOXD2O60548 495 aaPredicted RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 ADRB1P08588 477 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 PTMSP20962 102 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 MAOBP27338 520 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 GGCXP38435 758 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 CTSOP43234 321 aaPredicted RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 YWHAZP63104 245 aaKnown RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 ZNF33AQ06730 810 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 NNTQ13423 1086 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 DRAP1Q14919 205 aaPredicted RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 C2CD6Q53TS8 623 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 DCAF6Q58WW2 860 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 RAP1GAP2Q684P5 730 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 IL31Q6EBC2 164 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 SERPINA13PQ6UXR4 307 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 RBM43Q6ZSC3 357 aaKnown RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 TMPRSS6Q8IU80 811 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms