RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 C3orf62Q6ZUJ4 267 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 FAM131BQ86XD5 332 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 TMEM130Q8N3G9 435 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 SH2D3CQ8N5H7 860 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 FATE1Q969F0 183 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 HDAC11Q96DB2 347 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 VPS37BQ9H9H4 285 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 LRRC4CQ9HCJ2 640 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 ARHGEF38Q9NXL2 777 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 IL37Q9NZH6 218 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 IGSF9Q9P2J2 1179 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 PATJQ8NI35 1801 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 FAM92AA1XBS5 289 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 TNFRSF10BO14763 440 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 DCLK1O15075 740 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 PRPF4O43172 522 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD7-211ENST00000532149 FYNP06241 537 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 ZSCAN5DPP0CG00 497 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 GOT1P17174 413 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 FGFR3P22607 806 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 BRCC3P46736 316 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 OR1G1P47890 313 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 ATP1A2P50993 1020 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 AFF1P51825 1210 aaKnown RBP12.67□□□□□ -0.38
CHD7-211ENST00000532149 GDF10P55107 478 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 YWHAGP61981 247 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD7-211ENST00000532149 DNAJC3Q13217 504 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 NME3Q13232 169 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 EIF4EBP2Q13542 120 aaPredicted RBP12.67□□□□□ -0.38
CHD7-211ENST00000532149 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 CA9Q16790 459 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 YTHDF3Q7Z739 585 aaKnown RBP12.67□□□□□ -0.38
CHD7-211ENST00000532149 EXOC3L1Q86VI1 746 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 LRRC43Q8N309 656 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 CCDC185Q8N715 623 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 ANKLE1Q8NAG6 615 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 OVCA2Q8WZ82 227 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 GRAMD1AQ96CP6 724 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 MTBPQ96DY7 904 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 TSGA13Q96PP4 275 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 SMC6Q96SB8 1091 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 KCNK16Q96T55 309 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 FAM118BQ9BPY3 351 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 PIGVQ9NUD9 493 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 EURLQ9NYK6 297 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 SAE1Q9UBE0 346 aaPredicted RBP12.67□□□□□ -0.38
CHD7-211ENST00000532149 HCSTQ9UBK5 93 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 ZNF180Q9UJW8 692 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 NAALADL1Q9UQQ1 740 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
CHD7-211ENST00000532149 TEX264Q9Y6I9 313 aa12.67□□□□□ -0.38
CHD7-211ENST00000532149 PTPRDP23468 1912 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 NRP1O14786 923 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 HCRTO43612 131 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 ETS1P14921 441 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 MSH2P43246 934 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 NDUFV1P49821 464 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 SERPINB9P50453 376 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 PPIDQ08752 370 aaKnown RBP12.66□□□□□ -0.38
CHD7-211ENST00000532149 GPR17Q13304 367 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 FRG1Q14331 258 aaKnown RBP12.66□□□□□ -0.38
CHD7-211ENST00000532149 LONRF1Q17RB8 773 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 SYPL2Q5VXT5 272 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 TIGD7Q6NT04 549 aaPredicted RBP12.66□□□□□ -0.38
CHD7-211ENST00000532149 NLRP14Q86W24 1093 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 ANKS4BQ8N8V4 417 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 GLIS1Q8NBF1 620 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 PDZD8Q8NEN9 1154 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 EPS8L3Q8TE67 593 aaKnown RBP12.66□□□□□ -0.38
CHD7-211ENST00000532149 MAML1Q92585 1016 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 RNF34Q969K3 372 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 CHMP6Q96FZ7 201 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 XPO6Q96QU8 1125 aaKnown RBP12.66□□□□□ -0.38
CHD7-211ENST00000532149 LPIN3Q9BQK8 851 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 PAAF1Q9BRP4 392 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 RNF19AQ9NV58 838 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 OR12D3Q9UGF7 316 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 TLR6Q9Y2C9 796 aa12.66□□□□□ -0.38
CHD7-211ENST00000532149 SDR42E2A6NKP2 422 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 WASH4PA8MWX3 477 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 RASA4BC9J798 803 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 TM9SF1O15321 606 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 IRAK2O43187 625 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 RASA4O43374 803 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 KRT37O76014 449 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 DDHD2O94830 711 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 ZWINTO95229 277 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 BRAFP15056 766 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 AMPD1P23109 780 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 CCNCP24863 283 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 HOXC13P31276 330 aa12.65□□□□□ -0.38
CHD7-211ENST00000532149 MAGEA3P43357 314 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms