RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TYW5A2RUC4 315 aaKnown RBP23.08■■□□□ 1.29
LRRK1-208ENST00000532029 TMEM221A6NGB7 291 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 M0R296 226 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 MYO1FO00160 1098 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 STK25O00506 426 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 PAGE1O75459 146 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 TACR2P21452 398 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 PIGHQ14442 188 aaPredicted RBP23.08■■□□□ 1.29
LRRK1-208ENST00000532029 RAB6CQ53S08 254 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 RFWD3Q6PCD5 774 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 FAM3CQ92520 227 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 BHMTQ93088 406 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 TMA16Q96EY4 203 aaKnown RBP23.08■■□□□ 1.29
LRRK1-208ENST00000532029 XPO6Q96QU8 1125 aaKnown RBP23.08■■□□□ 1.29
LRRK1-208ENST00000532029 SIK2Q9H0K1 926 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 RAB6CQ9H0N0 254 aa23.08■■□□□ 1.29
LRRK1-208ENST00000532029 MRPS17Q9Y2R5 130 aaKnown RBP23.08■■□□□ 1.29
LRRK1-208ENST00000532029 F5H5T6 163 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 TYRP14679 529 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 SLC6A4P31645 630 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 STARD6P59095 220 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 KRT83P78385 493 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 ZNF252P-AS1Q0IIN9 211 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 ACAP1Q15027 740 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 MS4A13Q5J8X5 152 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 ACBD5Q5T8D3 534 aaPredicted RBP23.07■■□□□ 1.28
LRRK1-208ENST00000532029 PIK3R6Q5UE93 754 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 LRRC8AQ8IWT6 810 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 LGI2Q8N0V4 545 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 SLC35G2Q8TBE7 412 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 RFFLQ8WZ73 363 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 TBC1D17Q9HA65 648 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 LCMT1Q9UIC8 334 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 HS3ST4Q9Y661 456 aa23.07■■□□□ 1.28
LRRK1-208ENST00000532029 PTMAP06454 111 aaKnown RBP23.06■■□□□ 1.28
LRRK1-208ENST00000532029 TXLNBQ8N3L3 684 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 NAT16Q8N8M0 369 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 HJURPQ8NCD3 748 aaPredicted RBP23.06■■□□□ 1.28
LRRK1-208ENST00000532029 ACRBPQ8NEB7 543 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 CD101Q93033 1021 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 NTAN1Q96AB6 310 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 BTBD6Q96KE9 485 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 HAPLN3Q96S86 360 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 P2RY13Q9BPV8 354 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 ANLNQ9NQW6 1124 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 PLK2Q9NYY3 685 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 NCOR1O75376 2440 aa23.06■■□□□ 1.28
LRRK1-208ENST00000532029 KANSL1LA0AUZ9 987 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.05■■□□□ 1.28
LRRK1-208ENST00000532029 GFRA2O00451 464 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 ARHGAP6O43182 974 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 PENKP01210 267 aaPredicted RBP23.05■■□□□ 1.28
LRRK1-208ENST00000532029 CD72P21854 359 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 ADRA1BP35368 520 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 UBXN2BQ14CS0 331 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 PON2Q15165 354 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 GAB4Q2WGN9 574 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 EFHC2Q5JST6 749 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 RABGAP1LQ5R372 815 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 FYB2Q5VWT5 728 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 TXNDC11Q6PKC3 985 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 SLFN11Q7Z7L1 901 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 KIAA1328Q86T90 577 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 CCDC185Q8N715 623 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 FLCNQ8NFG4 579 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 C1orf74Q96LT6 269 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 PRMT1Q99873 361 aaKnown RBP23.05■■□□□ 1.28
LRRK1-208ENST00000532029 OSGEPQ9NPF4 335 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 TMPRSS4Q9NRS4 437 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 NDRG2Q9UN36 371 aaKnown RBP23.05■■□□□ 1.28
LRRK1-208ENST00000532029 BDP1A6H8Y1 2624 aa23.05■■□□□ 1.28
LRRK1-208ENST00000532029 COL4A3Q01955 1670 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 PRPSAP2O60256 369 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 CACNG3O60359 315 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 TBL1XO60907 577 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 GGCXP38435 758 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 OPRD1P41143 372 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 EIF2DP41214 584 aaKnown RBP23.04■■□□□ 1.28
LRRK1-208ENST00000532029 AIF1P55008 147 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 AUHQ13825 339 aaKnown RBP23.04■■□□□ 1.28
LRRK1-208ENST00000532029 PREPLQ4J6C6 727 aaPredicted RBP23.04■■□□□ 1.28
LRRK1-208ENST00000532029 LRRC31Q6UY01 552 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 NIPA2Q8N8Q9 360 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 CHFRQ96EP1 664 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 PRICKLE1Q96MT3 831 aaPredicted RBP23.04■■□□□ 1.28
LRRK1-208ENST00000532029 PNKPQ96T60 521 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 NELL2Q99435 816 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 LTB4R2Q9NPC1 389 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 DNAJC17Q9NVM6 304 aaKnown RBP23.04■■□□□ 1.28
LRRK1-208ENST00000532029 STIM2Q9P246 746 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 DEC1Q9P2X7 70 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 VANGL2Q9ULK5 521 aa23.04■■□□□ 1.28
LRRK1-208ENST00000532029 REXO2Q9Y3B8 237 aaKnown RBP23.04■■□□□ 1.28
LRRK1-208ENST00000532029 I6L893 689 aaPredicted RBP23.03■■□□□ 1.28
LRRK1-208ENST00000532029 TULP3O75386 442 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 LRCH4O75427 683 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 MTA2O94776 668 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 MIPP30301 263 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 PCK1P35558 622 aa23.03■■□□□ 1.28
LRRK1-208ENST00000532029 NOP2P46087 812 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms