RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TPI1P60174 286 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 ARMCX2Q7L311 632 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 OR52K1Q8NGK4 314 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 C7orf26Q96N11 449 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 IARS2Q9NSE4 1012 aaKnown RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 CLIC5Q9NZA1 410 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 ARFGEF1Q9Y6D6 1849 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 MYO18AQ92614 2054 aaKnown RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 A0A096LPK6 155 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 MT-CO1P00395 513 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 ITGA2BP08514 1039 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 TSHRP16473 764 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 ACAT1P24752 427 aaKnown RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 CLDN10P78369 228 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 PDK1Q15118 436 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 MAP1SQ66K74 1059 aaPredicted RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 KYAT3Q6YP21 454 aaKnown RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 OR6Y1Q8NGX8 325 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 NUF2Q9BZD4 464 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 ILKAPQ9H0C8 392 aaPredicted RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 MMADHCQ9H3L0 296 aaPredicted RBP11.65□□□□□ -0.54
NXF1-211ENST00000531709 PCDHA11Q9Y5I1 949 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 NHSQ6T4R5 1651 aa11.65□□□□□ -0.54
NXF1-211ENST00000531709 STBD1O95210 358 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 PIGRP01833 764 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 GRK2P25098 689 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 OCRLQ01968 901 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 DYNC1I2Q13409 638 aaKnown RBP11.65□□□□□ -0.55
NXF1-211ENST00000531709 KCNJ11Q14654 390 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 RPS6KA2Q15349 733 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 DEFB106AQ8N104 65 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 TDRD5Q8NAT2 981 aaKnown RBP11.65□□□□□ -0.55
NXF1-211ENST00000531709 LRRC39Q96DD0 335 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.55
NXF1-211ENST00000531709 PANX3Q96QZ0 392 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 CDRT15Q96T59 188 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 TBCBQ99426 244 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 MRPL45Q9BRJ2 306 aaKnown RBP11.65□□□□□ -0.55
NXF1-211ENST00000531709 XYLT2Q9H1B5 865 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 TCF7L2Q9NQB0 619 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 FETUBQ9UGM5 382 aa11.65□□□□□ -0.55
NXF1-211ENST00000531709 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 SIN3BO75182 1162 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 ATICP31939 592 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 CRHR1P34998 444 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 FDFT1P37268 417 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 PSEN1P49768 467 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 DHDDSQ86SQ9 333 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 SNX32Q86XE0 403 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 TTC39CQ8N584 583 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 SLC2A14Q8TDB8 520 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 NRG4Q8WWG1 115 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 EME1Q96AY2 570 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 CATSPER2Q96P56 530 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 POPDC2Q9HBU9 364 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 KANSL3Q9P2N6 904 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 PIN4Q9Y237 131 aaKnown RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 TNFSF13BQ9Y275 285 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 SSX2IPQ9Y2D8 614 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 DFFAO00273 331 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 ARF4P18085 180 aaPredicted RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 ROR2Q01974 943 aaKnown RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 PACS1Q6VY07 963 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 AFAP1L2Q8N4X5 818 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 APPL2Q8NEU8 664 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 AZIN2Q96A70 460 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 HIC2Q96JB3 615 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 EBF3Q9H4W6 596 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 ASB7Q9H672 318 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 KIAA1257Q9ULG3 409 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 TRAFD1O14545 582 aaPredicted RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 PHGDHO43175 533 aaKnown RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 MAGEC1O60732 1142 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 CRCPO75575 148 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 EPHA3P29320 983 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 GP5P40197 560 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 WASHC5Q12768 1159 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 TUBGCP5Q96RT8 1024 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 SUDS3Q9H7L9 328 aaPredicted RBP11.64□□□□□ -0.55
NXF1-211ENST00000531709 KCNK13Q9HB14 408 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 SIX4Q9UIU6 781 aa11.64□□□□□ -0.55
NXF1-211ENST00000531709 E7ESA3 106 aa11.63□□□□□ -0.55
NXF1-211ENST00000531709 PTPN7P35236 360 aa11.63□□□□□ -0.55
NXF1-211ENST00000531709 ABCE1P61221 599 aaKnown RBP11.63□□□□□ -0.55
NXF1-211ENST00000531709 TMED1Q13445 227 aa11.63□□□□□ -0.55
NXF1-211ENST00000531709 LBRQ14739 615 aaKnown RBP11.63□□□□□ -0.55
NXF1-211ENST00000531709 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
NXF1-211ENST00000531709 MTHFD1LQ6UB35 978 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms