RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 DCAF17Q5H9S7 520 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 ATG16L1Q676U5 607 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 NXNQ6DKJ4 435 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ZCCHC8Q6NZY4 707 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 HAUS6Q7Z4H7 955 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 LCORLQ8N3X6 602 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FAM47BQ8NA70 645 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ETNPPLQ8TBG4 499 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 RASSF5Q8WWW0 418 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FIG4Q92562 907 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 NGLY1Q96IV0 654 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FAM118BQ9BPY3 351 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 RIOK1Q9BRS2 568 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 STN1Q9H668 368 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 UBA2Q9UBT2 640 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 NXF1Q9UBU9 619 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 DNAJC12Q9UKB3 198 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 POLHQ9Y253 713 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 CFL2Q9Y281 166 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ZHX2Q9Y6X8 837 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 NFASCO94856 1347 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 MYO3BQ8WXR4 1341 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ASNA1O43681 348 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 DYRK3O43781 588 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 LRRN2O75325 713 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 BANF1O75531 89 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ZMPSTE24O75844 475 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ALDH1A2O94788 518 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 CFL1P23528 166 aaKnown RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 MAP4P27816 1152 aaKnown RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 NAMPTP43490 491 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 CLCQ05315 142 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 FAAP100Q0VG06 881 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 DLG2Q15700 870 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 BBS9Q3SYG4 887 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 TBC1D10BQ4KMP7 808 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 FAM205BPQ63HN1 556 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 NEK5Q6P3R8 708 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 CDHR3Q6ZTQ4 885 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SLC20A1Q8WUM9 679 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 PIGBQ92521 554 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 TTC9Q92623 222 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 GIMAP5Q96F15 307 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 METTL2AQ96IZ6 378 aaKnown RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF512BQ96KM6 892 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 IL12RB2Q99665 862 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 TMEM121Q9BTD3 319 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF717Q9BY31 904 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ATP13A3Q9H7F0 1226 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 POLR1BQ9H9Y6 1135 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 MAGEE1Q9HCI5 957 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SH3GLB2Q9NR46 395 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 STMN3Q9NZ72 180 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 PLCH1Q4KWH8 1693 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 NUP98P52948 1817 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SNNO75324 88 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 MT-ND3P03897 115 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 KRT3P12035 628 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 XRCC1P18887 633 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ITIH1P19827 911 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 MATN1P21941 496 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SSTR3P32745 418 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 CASP3P42574 277 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 PHKA1P46020 1223 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 TMPRSS15P98073 1019 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 TAGLNQ01995 201 aaKnown RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 CDC20Q12834 499 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 NDUFAF5Q5TEU4 345 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 UNC5AQ6ZN44 842 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SLC22A16Q86VW1 577 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SYNE4Q8N205 404 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF786Q8N393 782 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 MAGEB6Q8N7X4 407 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 GLIS1Q8NBF1 620 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SLC4A11Q8NBS3 891 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 DAGLBQ8NCG7 672 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 GLMNQ92990 594 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SLC35C1Q96A29 364 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 KLHL32Q96NJ5 620 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 TARS2Q9BW92 718 aaKnown RBP7.99□□□□□ -1.13
PTPRK-219ENST00000531050 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 SYTL2Q9HCH5 934 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 POLE4Q9NR33 117 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 MOCS1Q9NZB8 636 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 ARHGAP26Q9UNA1 814 aa7.99□□□□□ -1.13
PTPRK-219ENST00000531050 LOC100653049A0A140TA62 436 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 CCDC195A0A1B0GUA6 201 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 RNF103O00237 685 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 DNALI1O14645 258 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-219ENST00000531050 HTRA2O43464 458 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-219ENST00000531050 AKAP3O75969 853 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 KRT34O76011 436 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 GH2P01242 217 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 UGT2B4P06133 528 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 TBXAS1P24557 533 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-219ENST00000531050 CLCNKBP51801 687 aa7.98□□□□□ -1.13
PTPRK-219ENST00000531050 EVA1CP58658 441 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms