RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 C12orf50Q8NA57 414 aaPredicted RBP12.53□□□□□ -0.4
COPB1-206ENST00000529210 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
COPB1-206ENST00000529210 RLN3Q8WXF3 142 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 FAM149B1Q96BN6 582 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 LMLNQ96KR4 655 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 SLC2A13Q96QE2 648 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 CPXM1Q96SM3 734 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 SAMSN1Q9NSI8 373 aaKnown RBP12.53□□□□□ -0.4
COPB1-206ENST00000529210 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 DAAM1Q9Y4D1 1078 aa12.53□□□□□ -0.4
COPB1-206ENST00000529210 WASH3PC4AMC7 463 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 AP5Z1O43299 807 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 IGLV3-19P01714 112 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
COPB1-206ENST00000529210 SLC6A4P31645 630 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 SCNN1AP37088 669 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 WASP42768 502 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 SGSHP51688 502 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 MTA1Q13330 715 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 STARD3Q14849 445 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 FUT11Q495W5 492 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 EFHC1Q5JVL4 640 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 SLC47A2Q86VL8 602 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 HJURPQ8NCD3 748 aaPredicted RBP12.52□□□□□ -0.41
COPB1-206ENST00000529210 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
COPB1-206ENST00000529210 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 PPP1R13BQ96KQ4 1090 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 NOX5Q96PH1 765 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 TMEM245Q9H330 911 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 FBRSQ9HAH7 460 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 RXFP3Q9NSD7 469 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 TMEM51Q9NW97 253 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.41
COPB1-206ENST00000529210 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 INVSQ9Y283 1065 aa12.52□□□□□ -0.41
COPB1-206ENST00000529210 CAPN9O14815 690 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 TSPAN3O60637 253 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 HSF2BPO75031 334 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 TRUB2O95900 331 aaKnown RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 UCHL3P15374 230 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 KRT9P35527 623 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 USP8P40818 1118 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 PI4KAP42356 2102 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 PTGER3P43115 390 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 GABRB2P47870 512 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 COPAP53621 1224 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 CAMK2GQ13555 558 aaPredicted RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 ARID5BQ14865 1188 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 DRAP1Q14919 205 aaPredicted RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 PTPN20Q4JDL3 420 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 STPG1Q5TH74 334 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 RFWD3Q6PCD5 774 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 OLFML1Q6UWY5 402 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 SLC26A9Q7LBE3 791 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 SYT12Q8IV01 421 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 PGBD3Q8N328 593 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 KDM1BQ8NB78 822 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 ZNF419Q96HQ0 510 aaPredicted RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 BTN2A3PQ96KV6 586 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 PRICKLE1Q96MT3 831 aaPredicted RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 STK33Q9BYT3 514 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 MKRN2Q9H000 416 aaKnown RBP12.51□□□□□ -0.41
COPB1-206ENST00000529210 ITM2CQ9NQX7 267 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 ABCB8Q9NUT2 735 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.41
COPB1-206ENST00000529210 GGA2Q9UJY4 613 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 FHOD1Q9Y613 1164 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 RAD54BQ9Y620 910 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 NCOR2Q9Y618 2525 aa12.51□□□□□ -0.41
COPB1-206ENST00000529210 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 GOLGA6L7A0A1B0GV03 622 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 LNP1A1A4G5 178 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 TYW5A2RUC4 315 aaKnown RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 LRRC10BA6NIK2 292 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 KCNU1A8MYU2 1149 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 MAP3K13O43283 966 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 TBL1XO60907 577 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 APOEP02649 317 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 ATP5BP06576 529 aaKnown RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 SLC2A3P11169 496 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 CYP11B1P15538 503 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 CCDC6Q16204 474 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 PTPRNQ16849 979 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 LYSMD4Q5XG99 296 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 SLC23A3Q6PIS1 610 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms