RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PPP1R2P41236 205 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 MXI1P50539 228 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 NDST1P52848 882 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 TMPRSS3P57727 454 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 RAB15P59190 212 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 SEMG2Q02383 582 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 INCA1Q0VD86 236 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 ORC1Q13415 861 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 STIM1Q13586 685 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 RTP5Q14D33 572 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CAMK4Q16566 473 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CBWD6Q4V339 395 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CBWD3Q5JTY5 395 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CBWD5Q5RIA9 395 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 HIST2H2BCQ6DN03 193 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 DENND5BQ6ZUT9 1274 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 ACOT1Q86TX2 421 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 MON1AQ86VX9 555 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 UNC93AQ86WB7 457 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CMTM8Q8IZV2 173 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 FUKQ8N0W3 1084 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 MAB21L3Q8N8X9 362 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 FBXL13Q8NEE6 735 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 TSTD1Q8NFU3 115 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 RPLP0P6Q8NHW5 317 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 RIN3Q8TB24 985 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 NELFBQ8WX92 580 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 SLC35C1Q96A29 364 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 ZFYVE19Q96K21 471 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 TNIP3Q96KP6 325 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 GCNAQ96QF7 691 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 SLC22A12Q96S37 553 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 KCNK16Q96T55 309 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 FAM117AQ9C073 453 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 ELOVL4Q9GZR5 314 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CUEDC1Q9NWM3 386 aaPredicted RBP8.94□□□□□ -0.98
SSBP3-212ENST00000528930 RAB20Q9NX57 234 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 OBP2AQ9NY56 170 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 UXTQ9UBK9 157 aaPredicted RBP8.94□□□□□ -0.98
SSBP3-212ENST00000528930 CCL26Q9Y258 94 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 BOD1L1Q8NFC6 3051 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 NBASA2RRP1 2371 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 STX10O60499 249 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 CILPO75339 1184 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 CLSTN1O94985 981 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 IGHA1P01876 353 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 MYF5P13349 255 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 ANXA13P27216 316 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 STX17P56962 302 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 TNK2Q07912 1038 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 NFATC3Q12968 1075 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 ITPRIPL2Q3MIP1 535 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 FBXO43Q4G163 708 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 C2orf27AQ580R0 203 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 TCERG1LQ5VWI1 586 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 KLHL10Q6JEL2 608 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 FAM35AQ86V20 835 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 C12orf29Q8N999 325 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 TRIML1Q8N9V2 468 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 ZMIZ2Q8NF64 920 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 MDGA1Q8NFP4 955 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 LRRN4Q8WUT4 740 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 MRPS31Q92665 395 aaKnown RBP8.93□□□□□ -0.98
SSBP3-212ENST00000528930 USP13Q92995 863 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-212ENST00000528930 SCARF2Q96GP6 870 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-212ENST00000528930 FAXDC2Q96IV6 333 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 CEP63Q96MT8 703 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 MED15Q96RN5 788 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 CYP2S1Q96SQ9 504 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 SMOQ99835 787 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 IMPG2Q9BZV3 1241 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 NIF3L1Q9GZT8 377 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 CYP3A43Q9HB55 503 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 METTL14Q9HCE5 456 aaKnown RBP8.93□□□□□ -0.98
SSBP3-212ENST00000528930 LMBRD1Q9NUN5 540 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 IL37Q9NZH6 218 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 GCNT4Q9P109 453 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 ARMCX3Q9UH62 379 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-212ENST00000528930 CTNND2Q9UQB3 1225 aa8.93□□□□□ -0.98
SSBP3-212ENST00000528930 MYO18AQ92614 2054 aaKnown RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 BICDL2A1A5D9 508 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 FAM92AA1XBS5 289 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 C2orf78A6NCI8 922 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF840PA6NDX5 716 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 PMM2O15305 246 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 SUV39H1O43463 412 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 BEST1O76090 585 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 CELA2BP08218 269 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 CCDC130P13994 396 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 AVPR1AP37288 418 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 UCNP55089 124 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 TAF10Q12962 218 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF268Q14587 947 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 DCAF17Q5H9S7 520 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 ANO7Q6IWH7 933 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 ERICH1Q86X53 443 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 NUP93Q8N1F7 819 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 CCDC150Q8NCX0 1101 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms