RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ZNF37AP17032 561 aaPredicted RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 DDX6P26196 483 aaKnown RBP eCLIP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 GKP32189 559 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 THBS4P35443 961 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 PCP4P48539 62 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 CLK3P49761 638 aaKnown RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 CCT4P50991 539 aaKnown RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 PDE1AP54750 535 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 HNRNPA0Q13151 305 aaKnown RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 SF3B3Q15393 1217 aaKnown RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 AAK1Q2M2I8 961 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 PRICKLE4Q2TBC4 344 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D25Q3MII6 688 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 AASDHQ4L235 1098 aaPredicted RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 SLC45A4Q5BKX6 768 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 CBWD5Q5RIA9 395 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 TREML2Q5T2D2 321 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 NAA35Q5VZE5 725 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 FAM90A2PQ658T7 463 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 HAUS3Q68CZ6 603 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 ANKRD40Q6AI12 368 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 GRHL2Q6ISB3 625 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 LRRC8DQ7L1W4 858 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 ADGRG3Q86Y34 549 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 P3H2Q8IVL5 708 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 OR4N4Q8N0Y3 316 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 LCORLQ8N3X6 602 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 FAM71DQ8N9W8 422 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 ZMIZ2Q8NF64 920 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 TOR1AIP2Q8NFQ8 470 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 ADAMTS15Q8TE58 950 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 SOCS4Q8WXH5 440 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 APOPT1Q96IL0 206 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 FAR2Q96K12 515 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 PPP1R10Q96QC0 940 aaKnown RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 PDCL3Q9H2J4 239 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 ACAD9Q9H845 621 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 TBCCD1Q9NVR7 557 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 CCNL1Q9UK58 526 aaPredicted RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 RAB21Q9UL25 225 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 TBX20Q9UMR3 447 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 RABGAP1Q9Y3P9 1069 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 COL4A3Q01955 1670 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 FNDC1Q4ZHG4 1894 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 A0A1W2PPH5 198 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ANKRD18BA2A2Z9 1011 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 PGPEP1LA6NFU8 196 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TMEM200CA6NKL6 621 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 MARCH11A6NNE9 402 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 SLC38A8A6NNN8 435 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 M0QYT0 321 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 CES2O00748 559 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 NKX2-8O15522 239 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 GFPT2O94808 682 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 RTN3O95197 1032 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 FESP07332 822 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 DLDP09622 509 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ALADP13716 330 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TNNT1P13805 278 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 GRK5P34947 590 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 PSMC2P35998 433 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 CLNS1AP54105 237 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 NAP1L1P55209 391 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 RPL15P61313 204 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 SUMO2P61956 95 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 GUCY1B3Q02153 619 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 RNASELQ05823 741 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 EIF2B5Q13144 721 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 DNASE1L3Q13609 305 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TP53BP2Q13625 1128 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 BMPR2Q13873 1038 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 CBFBQ13951 182 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 MEA1Q16626 185 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 LRRC24Q50LG9 513 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ZNF484Q5JVG2 852 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TEDDM1Q5T9Z0 273 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ITPRIPL1Q6GPH6 555 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ZNF280DQ6N043 979 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ACSM6Q6P461 480 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 PDXDC1Q6P996 788 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 VWA1Q6PCB0 445 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 SYNE3Q6ZMZ3 975 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 MAVSQ7Z434 540 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 GPR149Q86SP6 731 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 SIRT6Q8N6T7 355 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 PDILTQ8N807 584 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 PTGR2Q8N8N7 351 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 C1orf131Q8NDD1 294 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TDRD7Q8NHU6 1098 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 CREB3L4Q8TEY5 395 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D22AQ8WUA7 517 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 LPIN2Q92539 896 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 FUBP1Q96AE4 644 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 FKBP10Q96AY3 582 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 CTHRC1Q96CG8 243 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 R3HDM4Q96D70 268 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 RNF125Q96EQ8 232 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 MYEOVQ96EZ4 313 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ZNF764Q96H86 408 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 RBM17Q96I25 401 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms