RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 TMA16Q96EY4 203 aaKnown RBP12.07□□□□□ -0.48
CMTM1-211ENST00000528484 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
CMTM1-211ENST00000528484 TWNKQ96RR1 684 aa12.07□□□□□ -0.48
CMTM1-211ENST00000528484 UBXN6Q9BZV1 441 aa12.07□□□□□ -0.48
CMTM1-211ENST00000528484 MMRN2Q9H8L6 949 aa12.07□□□□□ -0.48
CMTM1-211ENST00000528484 SCML1Q9UN30 329 aa12.07□□□□□ -0.48
CMTM1-211ENST00000528484 PCDHGA1Q9Y5H4 931 aa12.07□□□□□ -0.48
CMTM1-211ENST00000528484 FAM47DPA6NHR8 397 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 MAPK13O15264 365 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 YKT6O15498 198 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 TSPAN3O60637 253 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 ZBED1O96006 694 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 ITGAVP06756 1048 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 DLDP09622 509 aaKnown RBP12.06□□□□□ -0.48
CMTM1-211ENST00000528484 C1SP09871 688 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 PDIA4P13667 645 aaKnown RBP12.06□□□□□ -0.48
CMTM1-211ENST00000528484 RPL13P26373 211 aaKnown RBP12.06□□□□□ -0.48
CMTM1-211ENST00000528484 GCLMP48507 274 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 RACK1P63244 317 aaKnown RBP12.06□□□□□ -0.48
CMTM1-211ENST00000528484 PTPRNQ16849 979 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 PIP4K2CQ8TBX8 421 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 CYB5D2Q8WUJ1 264 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 BAP1Q92560 729 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 LRRC4Q9HBW1 653 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 ABCB8Q9NUT2 735 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 HESX1Q9UBX0 185 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 GGA2Q9UJY4 613 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 HBS1LQ9Y450 684 aaKnown RBP12.06□□□□□ -0.48
CMTM1-211ENST00000528484 AK5Q9Y6K8 562 aa12.06□□□□□ -0.48
CMTM1-211ENST00000528484 SETXQ7Z333 2677 aaKnown RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 LRRC72A6NJI9 287 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 H0Y8X5 98 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TK2O00142 265 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 PLK4O00444 970 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 ENC1O14682 589 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 CAPN9O14815 690 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 PAPSS1O43252 624 aaPredicted RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 RFPL3O75679 317 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 LDOC1O95751 146 aaPredicted RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 LATS1O95835 1130 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 MYL1P05976 194 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 PABPC1P11940 636 aaKnown RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 NR2F2P24468 414 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 HOXD9P28356 352 aaPredicted RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 HLA-FP30511 346 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 CTSKP43235 329 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TKTL1P51854 596 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 RPS14P62263 151 aaKnown RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 IL9RQ01113 521 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 ENPEPQ07075 957 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 STK4Q13043 487 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 SLC45A4Q5BKX6 768 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TMEM215Q68D42 235 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 KIAA0895LQ68EN5 471 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 PIGZQ86VD9 579 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 MARCH9Q86YJ5 346 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 FAM217AQ8IXS0 508 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 FAM186BQ8IYM0 893 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 SIX6OS1Q8N1H7 587 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 ZNF366Q8N895 744 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TMEM176AQ96HP8 235 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 BBC3Q96PG8 261 aaPredicted RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TMEM245Q9H330 911 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 KCTD10Q9H3F6 313 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 GDF3Q9NR23 364 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 AASDHPPTQ9NRN7 309 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 CLEC4EQ9ULY5 219 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 TMEM131Q92545 1883 aa12.05□□□□□ -0.48
CMTM1-211ENST00000528484 FLNBO75369 2602 aaKnown RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 HELZ2Q9BYK8 2649 aaKnown RBP12.05□□□□□ -0.48
CMTM1-211ENST00000528484 A0A1B0GTQ1 180 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 KCNK3O14649 394 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 VILLO15195 856 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 STX10O60499 249 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 TRIM49P0CI25 452 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 TRIM49CP0CI26 452 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 GTF2H1P32780 548 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 PSMC2P35998 433 aaKnown RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 SLC11A2P49281 568 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 ARRB1P49407 418 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 SEMG2Q02383 582 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 RAB41Q5JT25 222 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 ADGRF1Q5T601 910 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 RESP18Q5W5W9 173 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 MBLAC2Q68D91 279 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 KRT39Q6A163 491 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 LAYNQ6UX15 382 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 USP30Q70CQ3 517 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 OXR1Q8N573 874 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 ANKRD52Q8NB46 1076 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 P2RY11Q96G91 374 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 1129.3 ms