RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ANLNQ9NQW6 1124 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 PCMTD2Q9NV79 361 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 ARL8BQ9NVJ2 186 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 PIH1D1Q9NWS0 290 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 MTO1Q9Y2Z2 717 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 SF3B1O75533 1304 aaKnown RBP eCLIP18.11■□□□□ 0.49
USH1C-205ENST00000527020 H3BRJ5 948 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 I6L893 689 aaPredicted RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 TOP3BO95985 862 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 AMHP03971 560 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 NEFHP12036 1026 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 SERPINB3P29508 390 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 FKBP1BP68106 108 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 AP1B1Q10567 949 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 PAFAH1B3Q15102 231 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 TEX44Q53QW1 395 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 TIFABQ6ZNK6 161 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 BZW1Q7L1Q6 419 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 LONP2Q86WA8 852 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 HACE1Q8IYU2 909 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 GSTCDQ8NEC7 633 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 DEPDC1BQ8WUY9 529 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 PTCD3Q96EY7 689 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 MIPEPQ99797 713 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 PRDM16Q9HAZ2 1276 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 EIF2B3Q9NR50 452 aaKnown RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 FBXO6Q9NRD1 293 aaPredicted RBP18.11■□□□□ 0.49
USH1C-205ENST00000527020 C17orf102A2RUQ5 167 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 CREB3O43889 395 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 OPHN1O60890 802 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 ANP32DO95626 131 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 PSMB4P28070 264 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 PTPN4P29074 926 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 CPT1AP50416 773 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 SERPINB9P50453 376 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 AFF1P51825 1210 aaKnown RBP18.1■□□□□ 0.49
USH1C-205ENST00000527020 MAP3K7CLP57077 242 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 BST1Q10588 318 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 HSF5Q4G112 596 aaPredicted RBP18.1■□□□□ 0.49
USH1C-205ENST00000527020 TLDC1Q6P9B6 456 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 MARK2Q7KZI7 788 aaKnown RBP18.1■□□□□ 0.49
USH1C-205ENST00000527020 NDUFAF2Q8N183 169 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 WNT8BQ93098 351 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 PRDM12Q9H4Q4 367 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 LRRC4Q9HBW1 653 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 TMEM30AQ9NV96 361 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 FAM237BA0A1B0GVD1 139 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 SDR42E2A6NKP2 422 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 FAM72CH0Y354 149 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 DCLK1O15075 740 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 HAUS5O94927 633 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 GM2AP17900 193 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 MGAT1P26572 445 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 CRHR1P34998 444 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 RASSF2P50749 326 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 TKTL1P51854 596 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 SLC8A3P57103 927 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 SARNPP82979 210 aaKnown RBP18.1■□□□□ 0.49
USH1C-205ENST00000527020 NME3Q13232 169 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 FAM72AQ5TYM5 149 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 FAM72DQ6L9T8 149 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 FAM72BQ86X60 149 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 ZNF567Q8N184 647 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 C7orf26Q96N11 449 aa18.1■□□□□ 0.49
USH1C-205ENST00000527020 ZNF395Q9H8N7 513 aaPredicted RBP18.1■□□□□ 0.49
USH1C-205ENST00000527020 MYL2P10916 166 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 OCRLQ01968 901 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 DEUP1Q05D60 604 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 PDK1Q15118 436 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 RFX8Q6ZV50 586 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 GPRIN1Q7Z2K8 1008 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 SIX6OS1Q8N1H7 587 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 NME8Q8N427 588 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 E2F7Q96AV8 911 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 MED10Q9BTT4 135 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 WDR6Q9NNW5 1121 aaKnown RBP18.09■□□□□ 0.49
USH1C-205ENST00000527020 KRT82Q9NSB4 513 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 STAP1Q9ULZ2 295 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 SHROOM3Q8TF72 1996 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 NUP205Q92621 2012 aa18.09■□□□□ 0.49
USH1C-205ENST00000527020 CCDC195A0A1B0GUA6 201 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 GSRP00390 522 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 FAM163BP0C2L3 166 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 CACNA2D1P54289 1103 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 SESN2P58004 480 aaPredicted RBP18.08■□□□□ 0.49
USH1C-205ENST00000527020 SEMA3BQ13214 749 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 CHI3L2Q15782 390 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 TTC7BQ86TV6 843 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 STKLD1Q8NE28 680 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 ZMIZ2Q8NF64 920 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 ADAM32Q8TC27 787 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 SENP8Q96LD8 212 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 SMOQ99835 787 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 GORASP1Q9BQQ3 440 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 C20orf27Q9GZN8 174 aa18.08■□□□□ 0.49
USH1C-205ENST00000527020 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.49
USH1C-205ENST00000527020 DDX43Q9NXZ2 648 aaKnown RBP18.08■□□□□ 0.49
USH1C-205ENST00000527020 NOP53Q9NZM5 478 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms