RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 GFRA2O00451 464 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 SCAMP3O14828 347 aaKnown RBP17.11■□□□□ 0.33
CAPN1-205ENST00000526954 PALMO75781 387 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 IL1R2P27930 398 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 TAS2R40P59535 323 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 NRG1Q02297 640 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-205ENST00000526954 GRM2Q14416 872 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 EML3Q32P44 896 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 FAM133BQ5BKY9 247 aaKnown RBP17.11■□□□□ 0.33
CAPN1-205ENST00000526954 MS4A13Q5J8X5 152 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 PIK3R6Q5UE93 754 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 POLNQ7Z5Q5 900 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 ASIC4Q96FT7 647 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 LINC00597Q9H2U6 94 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 GOLPH3Q9H4A6 298 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 TMPRSS4Q9NRS4 437 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 WNT6Q9Y6F9 365 aa17.11■□□□□ 0.33
CAPN1-205ENST00000526954 DOCK4Q8N1I0 1966 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 MYOFQ9NZM1 2061 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 ARNTLO00327 626 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 SPOPO43791 374 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 KRT7P08729 469 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 GDI1P31150 447 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 SLC6A4P31645 630 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 IFNAR2P48551 515 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 EFHC2Q5JST6 749 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 ZNF683Q8IZ20 524 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 CD101Q93033 1021 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 ATP2A3Q93084 1043 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 SNRNP25Q9BV90 132 aaKnown RBP17.1■□□□□ 0.33
CAPN1-205ENST00000526954 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
CAPN1-205ENST00000526954 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 PSTPIP1O43586 416 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 ASGR2P07307 311 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 RARAP10276 462 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 TACR2P21452 398 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 L1CAMP32004 1257 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
CAPN1-205ENST00000526954 SEMA3BQ13214 749 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 TDGQ13569 410 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 AUHQ13825 339 aaKnown RBP17.09■□□□□ 0.33
CAPN1-205ENST00000526954 C5orf22Q49AR2 442 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 ARTNQ5T4W7 220 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 TXNRD3NBQ6F5E7 133 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 NT5DC3Q86UY8 548 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.09■□□□□ 0.33
CAPN1-205ENST00000526954 RHOT1Q8IXI2 618 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 TRIM58Q8NG06 486 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 IRF7Q92985 503 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 ZFYVE19Q96K21 471 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 ALS2CR12Q96Q35 445 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 SIK2Q9H0K1 926 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 ZWILCHQ9H900 591 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 SPHK2Q9NRA0 654 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 OR12D3Q9UGF7 316 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 AP4E1Q9UPM8 1137 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 ZKSCAN5Q9Y2L8 839 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 HYOU1Q9Y4L1 999 aa17.09■□□□□ 0.33
CAPN1-205ENST00000526954 TICRRQ7Z2Z1 1910 aa17.08■□□□□ 0.33
CAPN1-205ENST00000526954 COL4A2P08572 1712 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 IGLV3-10A0A075B6K4 115 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 F5H5T6 163 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 NFATC1O95644 943 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 ZNF135P52742 658 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-205ENST00000526954 DHCR24Q15392 516 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 DPYSL2Q16555 572 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 TJAP1Q5JTD0 557 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 MPP7Q5T2T1 576 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 MANEALQ5VSG8 457 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 RAP1GAP2Q684P5 730 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 RHBDF2Q6PJF5 856 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 PEX26Q7Z412 305 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 CHSY1Q86X52 802 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 FAM71BQ8TC56 605 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 MAGEB5Q9BZ81 275 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 HPS4Q9NQG7 708 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.08■□□□□ 0.32
CAPN1-205ENST00000526954 MARK1Q9P0L2 795 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 AMFRQ9UKV5 643 aa17.08■□□□□ 0.32
CAPN1-205ENST00000526954 DRGXA6NNA5 263 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 E9PAM4 449 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 FAM72CH0Y354 149 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 ARSAP15289 507 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 CTNNA2P26232 953 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 HTR7P34969 479 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 ARSEP51690 589 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 RUNX3Q13761 415 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 CA9Q16790 459 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 SMTNL2Q2TAL5 461 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 MPPE1Q53F39 396 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 FAM72AQ5TYM5 149 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms