RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 WFDC5Q8TCV5 224 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 BHMTQ93088 406 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 TMA16Q96EY4 203 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 DNAJC7Q99615 494 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ISCUQ9H1K1 167 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 METTL5Q9NRN9 209 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 DNAJC17Q9NVM6 304 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 SPATA6Q9NWH7 488 aaPredicted RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLN8-207ENST00000524258 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ARHGEF38Q9NXL2 777 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ARHGAP20Q9P2F6 1191 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 DEC1Q9P2X7 70 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 LUC7L2Q9Y383 392 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
CLN8-207ENST00000524258 MYO18AQ92614 2054 aaKnown RBP12.41□□□□□ -0.42
CLN8-207ENST00000524258 SIGLEC16A6NMB1 481 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.4□□□□□ -0.42
CLN8-207ENST00000524258 M0QYT0 321 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 CBFA2T2O43439 604 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 ADAM23O75077 832 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 APODP05090 189 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 CALB1P05937 261 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 TNFAIP3P21580 790 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 RRM1P23921 792 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 HOXA6P31267 233 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 RFC1P35251 1148 aaPredicted RBP12.4□□□□□ -0.42
CLN8-207ENST00000524258 NSFP46459 744 aaKnown RBP12.4□□□□□ -0.42
CLN8-207ENST00000524258 SLC11A2P49281 568 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 RPS24P62847 133 aaKnown RBP12.4□□□□□ -0.42
CLN8-207ENST00000524258 DMWDQ09019 674 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 GEN1Q17RS7 908 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 ASTE1Q2TB18 679 aaPredicted RBP12.4□□□□□ -0.42
CLN8-207ENST00000524258 C5orf22Q49AR2 442 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 SH3PXD2AQ5TCZ1 1133 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 GRAMD4Q6IC98 578 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 TSSK4Q6SA08 328 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 C14orf80Q86SX3 495 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLN8-207ENST00000524258 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 MSANTD4Q8NCY6 345 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 RXFP2Q8WXD0 754 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 VCPIP1Q96JH7 1222 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 BTN2A3PQ96KV6 586 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 SLC2A11Q9BYW1 496 aa12.4□□□□□ -0.42
CLN8-207ENST00000524258 LAMTOR5O43504 91 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 MOCS2O96007 188 aaPredicted RBP12.39□□□□□ -0.43
CLN8-207ENST00000524258 SERPING1P05155 500 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 TACR2P21452 398 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 HLA-FP30511 346 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 CCR1P32246 355 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 GBP1P32455 592 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 PTPN9P43378 593 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 CXCL12P48061 93 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 DGKGP49619 791 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 IRAK1P51617 712 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 CCR3P51677 355 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 RPL7AP62424 266 aaKnown RBP12.39□□□□□ -0.43
CLN8-207ENST00000524258 MRPS21P82921 87 aaKnown RBP12.39□□□□□ -0.43
CLN8-207ENST00000524258 OGDHQ02218 1023 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 NME3Q13232 169 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 ENPP2Q13822 863 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 C15orf59Q2T9L4 293 aaPredicted RBP12.39□□□□□ -0.43
CLN8-207ENST00000524258 SYT13Q7L8C5 426 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 ZBTB44Q8NCP5 570 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 RPLP0P6Q8NHW5 317 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
CLN8-207ENST00000524258 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 TMPRSS4Q9NRS4 437 aa12.39□□□□□ -0.43
CLN8-207ENST00000524258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLN8-207ENST00000524258 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
CLN8-207ENST00000524258 FRYLO94915 3013 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SYNJ2BP-COX16A0A087WUM0 186 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 A0A087X0T9 212 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 TBC1D3BA6NDS4 549 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 PROB1E7EW31 1015 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SGK1O00141 431 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 TBL1XO60907 577 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 LILRB5O75023 590 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 RTN2O75298 545 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 PAGE1O75459 146 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 F9P00740 461 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 APOEP02649 317 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 FTLP02792 175 aaPredicted RBP12.38□□□□□ -0.43
CLN8-207ENST00000524258 FAM228BP0C875 321 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SLC2A3P11169 496 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 KRT3P12035 628 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 PDGFRAP16234 1089 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 NBL1P41271 181 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SULT1E1P49888 294 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SEC13P55735 322 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms