RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 TRMT11Q7Z4G4 463 aaKnown RBP13.02□□□□□ -0.33
VEGFA-225ENST00000523950 MCOLN2Q8IZK6 566 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-225ENST00000523950 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 RNF34Q969K3 372 aa13.02□□□□□ -0.33
VEGFA-225ENST00000523950 TCRBV5S1A1TA0A578 114 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 TBC1D3BA6NDS4 549 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 GOLGA6L3A6NEY3 463 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 F5H5T6 163 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 DDX3XO00571 662 aaKnown RBP eCLIP13.01□□□□□ -0.331e-15■□□□□ 9.6
VEGFA-225ENST00000523950 NPC1O15118 1278 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 ENDOD1O94919 500 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 MOCS2O96007 188 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-225ENST00000523950 CISD3P0C7P0 127 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 MYBL1P10243 752 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 DESP17661 470 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 HOXA6P31267 233 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 SLC6A4P31645 630 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 PTPN9P43378 593 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 NRLP54845 237 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 EIF4HQ15056 248 aaKnown RBP13.01□□□□□ -0.33
VEGFA-225ENST00000523950 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
VEGFA-225ENST00000523950 NADSYN1Q6IA69 706 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 TRNP1Q6NT89 227 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 ANKS1BQ7Z6G8 1248 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 MAML2Q8IZL2 1156 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-225ENST00000523950 OR8K1Q8NGG5 319 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 RPLP0P6Q8NHW5 317 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 WFIKKN2Q8TEU8 576 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 TBCBQ99426 244 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 TRIM5Q9C035 493 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 RBSNQ9H1K0 784 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 WDCPQ9H6R7 721 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 PIGVQ9NUD9 493 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 ZNHIT6Q9NWK9 470 aaKnown RBP13.01□□□□□ -0.33
VEGFA-225ENST00000523950 ARHGEF38Q9NXL2 777 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 FANCMQ8IYD8 2048 aa13.01□□□□□ -0.33
VEGFA-225ENST00000523950 SYNJ2BP-COX16A0A087WUM0 186 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 TSPAN3O60637 253 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 SP9P0CG40 484 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 SKILP12757 684 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 PDGFRAP16234 1089 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 TACR2P21452 398 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 GPD1P21695 349 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 RRM1P23921 792 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 KIR2DL1P43626 348 aaPredicted RBP13□□□□□ -0.33
VEGFA-225ENST00000523950 MRE11P49959 708 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 EOGTQ5NDL2 527 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 RABGAP1LQ5R372 815 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 C10orf76Q5T2E6 689 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
VEGFA-225ENST00000523950 CNGA4Q8IV77 575 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 CCDC117Q8IWD4 279 aaPredicted RBP13□□□□□ -0.33
VEGFA-225ENST00000523950 CAMKK1Q8N5S9 505 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 EMC1Q8N766 993 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 DDX51Q8N8A6 666 aaKnown RBP eCLIP13□□□□□ -0.337e-8■■□□□ 11.5
VEGFA-225ENST00000523950 UCMAQ8WVF2 138 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 RXFP2Q8WXD0 754 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 NELL1Q92832 810 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 BHMTQ93088 406 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 PRICKLE1Q96MT3 831 aaPredicted RBP13□□□□□ -0.33
VEGFA-225ENST00000523950 DNAJC7Q99615 494 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 PRMT1Q99873 361 aaKnown RBP13□□□□□ -0.33
VEGFA-225ENST00000523950 TKTL2Q9H0I9 626 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 ISCUQ9H1K1 167 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 PARVAQ9NVD7 372 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 TAS2R14Q9NYV8 317 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 COX16Q9P0S2 106 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 SCINQ9Y6U3 715 aa13□□□□□ -0.33
VEGFA-225ENST00000523950 CCDC163A0A0D9SF12 145 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 GOLGA6L7A0A1B0GV03 622 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 SSU72P8A0A1W2PR75 194 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 H0Y858 1186 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 TIMM44O43615 452 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 TBL1XO60907 577 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 MFAP3LO75121 409 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 PAGE1O75459 146 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 TDGF1P13385 188 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 RFC1P35251 1148 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ZNF143P52747 638 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 OXCT1P55809 520 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 SATB1Q01826 763 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 CSTF1Q05048 431 aaKnown RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 MESP2Q0VG99 397 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ARL13BQ3SXY8 428 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 CCDC14Q49A88 953 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 C5orf22Q49AR2 442 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 RAP1GAP2Q684P5 730 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 PLEKHA7Q6IQ23 1121 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 RFWD3Q6PCD5 774 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms