RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
VEGFA-224ENST00000523873 CHKAP35790 457 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 CXCR3P49682 368 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 CLCN5P51795 746 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 AMPD2Q01433 879 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 ADGRF1Q5T601 910 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 PPP1R2P3Q6NXS1 205 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 DCUN1D2Q6PH85 259 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 BNIPLQ7Z465 357 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 CHSY1Q86X52 802 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 FAM131BQ86XD5 332 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 CFAP52Q8N1V2 620 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 PHTF2Q8N3S3 785 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 ATP6V0D2Q8N8Y2 350 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 DDI1Q8WTU0 396 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 ARHGEF26Q96DR7 871 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-224ENST00000523873 TKTL2Q9H0I9 626 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 NHEJ1Q9H9Q4 299 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-224ENST00000523873 DNAJC17Q9NVM6 304 aaKnown RBP13.3□□□□□ -0.28
VEGFA-224ENST00000523873 RRN3Q9NYV6 651 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 STIM2Q9P246 746 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 EML5Q05BV3 1969 aa13.3□□□□□ -0.28
VEGFA-224ENST00000523873 AKR1B10O60218 316 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 CACNG3O60359 315 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 TBL1XO60907 577 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PAGE1O75459 146 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 TACR2P21452 398 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 HOXD9P28356 352 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PTPN9P43378 593 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 IRAK1P51617 712 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 GALCP54803 685 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 SEC13P55735 322 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 HDAC4P56524 1084 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 RPS24P62847 133 aaKnown RBP13.29□□□□□ -0.28
VEGFA-224ENST00000523873 ZNF252P-AS1Q0IIN9 211 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 GRSF1Q12849 480 aaKnown RBP eCLIP13.29□□□□□ -0.28
VEGFA-224ENST00000523873 CCINQ13939 588 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 GAS6Q14393 721 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PPP2R5DQ14738 602 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 MS4A13Q5J8X5 152 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 GRAMD4Q6IC98 578 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 SND1Q7KZF4 910 aaKnown RBP eCLIP13.29□□□□□ -0.284e-9■■□□□ 11.9
VEGFA-224ENST00000523873 C14orf80Q86SX3 495 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 CIR1Q86X95 450 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-224ENST00000523873 FAM172AQ8WUF8 416 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 AZIN2Q96A70 460 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 TMA16Q96EY4 203 aaKnown RBP13.29□□□□□ -0.28
VEGFA-224ENST00000523873 BTN2A3PQ96KV6 586 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PNKPQ96T60 521 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 NELL2Q99435 816 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PRMT1Q99873 361 aaKnown RBP13.29□□□□□ -0.28
VEGFA-224ENST00000523873 MAGEB5Q9BZ81 275 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 OSBPL6Q9BZF3 934 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 SIK2Q9H0K1 926 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 WDCPQ9H6R7 721 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 ZDHHC4Q9NPG8 344 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 PARVAQ9NVD7 372 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 ARHGEF38Q9NXL2 777 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 HS3ST4Q9Y661 456 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 NUP205Q92621 2012 aa13.29□□□□□ -0.28
VEGFA-224ENST00000523873 MUC22E2RYF6 1773 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-224ENST00000523873 K7EQS6 105 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 RNF40O75150 1001 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 ENDOD1O94919 500 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 KAT7O95251 611 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CYBBP04839 570 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 APODP05090 189 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CISD3P0C7P0 127 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 SLC2A3P11169 496 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 PSMA2P25787 234 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CDC25BP30305 580 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 ZNF143P52747 638 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-224ENST00000523873 LRRC32Q14392 662 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 BRMS1LQ5PSV4 323 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 EMC10Q5UCC4 262 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 DAB2IPQ5VWQ8 1189 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CCDC185Q8N715 623 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 WFDC5Q8TCV5 224 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CLDN23Q96B33 292 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 TRIM11Q96F44 468 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
VEGFA-224ENST00000523873 POLR3BQ9NW08 1133 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-224ENST00000523873 C2orf42Q9NWW7 574 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 DEC1Q9P2X7 70 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 SLC12A6Q9UHW9 1150 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 VANGL2Q9ULK5 521 aa13.28□□□□□ -0.28
VEGFA-224ENST00000523873 CHD5Q8TDI0 1954 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms