RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SLC38A8A6NNN8 435 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 EFCAB8A8MWE9 144 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 TARM1B6A8C7 271 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 B9A039 149 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 FAM155BO75949 473 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 LARGE1O95461 756 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 MT-CO3P00414 261 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 VDRP11473 427 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 ADD2P35612 726 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 CCT5P48643 541 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 JAK3P52333 1124 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 PPFIA1Q13136 1202 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 GALNTL6Q49A17 601 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 ZNF569Q5MCW4 686 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 FTSJ3Q8IY81 847 aaKnown RBP5.58□□□□□ -1.52
SKP1-211ENST00000523359 SMAP1Q8IYB5 467 aaPredicted RBP5.58□□□□□ -1.52
SKP1-211ENST00000523359 OR52L2PQ8NGH6 319 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 OR6Y1Q8NGX8 325 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 AFG1LQ8WV93 481 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 SNRNP27Q8WVK2 155 aaKnown RBP5.58□□□□□ -1.52
SKP1-211ENST00000523359 CPT1BQ92523 772 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 SARAFQ96BY9 339 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 GCC1Q96CN9 775 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 FAR2Q96K12 515 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 ELOVL1Q9BW60 279 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 R3HDMLQ9H3Y0 253 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 SEPSECSQ9HD40 501 aaKnown RBP5.58□□□□□ -1.52
SKP1-211ENST00000523359 SEMA4GQ9NTN9 838 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 ARPP21Q9UBL0 812 aaPredicted RBP5.58□□□□□ -1.52
SKP1-211ENST00000523359 TRPC5Q9UL62 973 aaPredicted RBP5.58□□□□□ -1.52
SKP1-211ENST00000523359 LZTS1Q9Y250 596 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 ZBTB1Q9Y2K1 713 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 WNT6Q9Y6F9 365 aa5.58□□□□□ -1.52
SKP1-211ENST00000523359 TCRBV5S1A1TA0A578 114 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 H7C1Q1 480 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SMIM22K7EJ46 135 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 CLIC1O00299 241 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 NKX2-8O15522 239 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 GCATO75600 419 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 KRT38O76015 456 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 C1RP00736 705 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 LDHCP07864 332 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 MATN1P21941 496 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SERPINA4P29622 427 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 FAM3BP58499 235 aaPredicted RBP5.57□□□□□ -1.52
SKP1-211ENST00000523359 C21orf58P58505 322 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 RPL15P61313 204 aaKnown RBP5.57□□□□□ -1.52
SKP1-211ENST00000523359 GAB1Q13480 694 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 CBFBQ13951 182 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SIM2Q14190 667 aaPredicted RBP5.57□□□□□ -1.52
SKP1-211ENST00000523359 KCTD2Q14681 263 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 ADCK5Q3MIX3 580 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 CCDC184Q52MB2 194 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 TMEM65Q6PI78 240 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SYCE2Q6PIF2 218 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 DCDC5Q6ZRR9 648 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 RD3Q7Z3Z2 195 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 GLMPQ8WWB7 406 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 THAP4Q8WY91 577 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SECISBP2LQ93073 1101 aaKnown RBP5.57□□□□□ -1.52
SKP1-211ENST00000523359 CCDC17Q96LX7 622 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 NEUROD6Q96NK8 337 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 ADGRE3Q9BY15 652 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 TMX4Q9H1E5 349 aaPredicted RBP5.57□□□□□ -1.52
SKP1-211ENST00000523359 CDCP1Q9H5V8 836 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 LIN7CQ9NUP9 197 aaKnown RBP5.57□□□□□ -1.52
SKP1-211ENST00000523359 FEM1BQ9UK73 627 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SLC12A4Q9UP95 1085 aa5.57□□□□□ -1.52
SKP1-211ENST00000523359 SPATA31A6Q5VVP1 1343 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 H3BNC9 293 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 NPHP1O15259 732 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 C1QL1O75973 258 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 IGLV2-14P01704 120 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 NHLRC4P0CG21 123 aaPredicted RBP5.56□□□□□ -1.52
SKP1-211ENST00000523359 HSD3B1P14060 373 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 ATF7P17544 494 aaPredicted RBP5.56□□□□□ -1.52
SKP1-211ENST00000523359 DUSP1P28562 367 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 WDR5P61964 334 aaKnown RBP5.56□□□□□ -1.52
SKP1-211ENST00000523359 AWAT1Q58HT5 328 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 ANKRD45Q5TZF3 282 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 SYT13Q7L8C5 426 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 ANKRD18AQ8IVF6 992 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 SPPL3Q8TCT6 385 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 GOLGA1Q92805 767 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 TRMT61AQ96FX7 289 aaKnown RBP5.56□□□□□ -1.52
SKP1-211ENST00000523359 ADARB2Q9NS39 739 aaKnown RBP5.56□□□□□ -1.52
SKP1-211ENST00000523359 SAGE1Q9NXZ1 904 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 NDUFAF4Q9P032 175 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 KCND3Q9UK17 655 aa5.56□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3DA0A087WVF3 549 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3IA0A087WXS9 549 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3EA0A087X179 549 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3KA0A087X1G2 549 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3BA6NDS4 549 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3FA6NER0 549 aaPredicted RBP5.55□□□□□ -1.52
SKP1-211ENST00000523359 LRRC3CA6NJW4 275 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3LB9A6J9 549 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 E7EVH7 732 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 CYP21A2P08686 494 aa5.55□□□□□ -1.52
SKP1-211ENST00000523359 TBC1D3HP0C7X1 549 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms