RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PAPSS1O43252 624 aaPredicted RBP21.52■■□□□ 1.04
SDCBP-209ENST00000522243 TIMM44O43615 452 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 PABPC1P11940 636 aaKnown RBP21.52■■□□□ 1.04
SDCBP-209ENST00000522243 ENGP17813 658 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 RING1Q06587 406 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 EXOC3L4Q17RC7 722 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 PEAR1Q5VY43 1037 aaPredicted RBP21.52■■□□□ 1.04
SDCBP-209ENST00000522243 PSAPL1Q6NUJ1 521 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 SLC23A3Q6PIS1 610 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 RGL4Q8IZJ4 473 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 ZNF366Q8N895 744 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 WFIKKN2Q8TEU8 576 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 SERPINB11Q96P15 392 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 APEX2Q9UBZ4 518 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 TJP2Q9UDY2 1190 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 GGA2Q9UJY4 613 aa21.52■■□□□ 1.04
SDCBP-209ENST00000522243 AJAP1Q9UKB5 411 aaPredicted RBP21.52■■□□□ 1.04
SDCBP-209ENST00000522243 GON4LQ3T8J9 2241 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 SPTBN2O15020 2390 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 KCNJ18B7U540 433 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 CAPN9O14815 690 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 GIPC1O14908 333 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 SART1O43290 800 aaKnown RBP21.51■■□□□ 1.03
SDCBP-209ENST00000522243 MOCS2O96007 188 aaPredicted RBP21.51■■□□□ 1.03
SDCBP-209ENST00000522243 PON1P27169 355 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 CD6P30203 668 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 CD70P32970 193 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 DPP6P42658 865 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 NOVA1P51513 510 aaKnown RBP21.51■■□□□ 1.03
SDCBP-209ENST00000522243 COPAP53621 1224 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 LMAN2Q12907 356 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 DUOXA1Q1HG43 343 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 FNDC3BQ53EP0 1204 aaKnown RBP21.51■■□□□ 1.03
SDCBP-209ENST00000522243 HSP90AA4PQ58FG1 418 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 TAC4Q86UU9 113 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 ADIPOR2Q86V24 386 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 STK32AQ8WU08 396 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 PRCCQ92733 491 aaPredicted RBP21.51■■□□□ 1.03
SDCBP-209ENST00000522243 MYEOVQ96EZ4 313 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 SIPA1Q96FS4 1042 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 ITM2CQ9NQX7 267 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 TLR6Q9Y2C9 796 aa21.51■■□□□ 1.03
SDCBP-209ENST00000522243 MUC22E2RYF6 1773 aaPredicted RBP21.51■■□□□ 1.03
SDCBP-209ENST00000522243 MAOBP27338 520 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 E2F5Q15329 346 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 DPCR1Q3MIW9 517 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 MBLAC2Q68D91 279 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 KIAA0907Q7Z7F0 614 aaPredicted RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 TMEM110Q86TL2 294 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 METTL3Q86U44 580 aaKnown RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 PASD1Q8IV76 773 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 AHI1Q8N157 1196 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 AZIN2Q96A70 460 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 TOE1Q96GM8 510 aaKnown RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 SLC39A13Q96H72 371 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 ZNF419Q96HQ0 510 aaPredicted RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 FAM81BQ96LP2 452 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 PRICKLE1Q96MT3 831 aaPredicted RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 GTPBP2Q9BX10 602 aaKnown RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 GPR174Q9BXC1 333 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 NUCKS1Q9H1E3 243 aaKnown RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 SIX2Q9NPC8 291 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 WSB2Q9NYS7 404 aaPredicted RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 USP36Q9P275 1121 aaKnown RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 XPO7Q9UIA9 1087 aaKnown RBP21.5■■□□□ 1.03
SDCBP-209ENST00000522243 SLC6A14Q9UN76 642 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 PLA2G4CQ9UP65 541 aa21.5■■□□□ 1.03
SDCBP-209ENST00000522243 TPMTP51580 245 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 RPS24P62847 133 aaKnown RBP21.49■■□□□ 1.03
SDCBP-209ENST00000522243 PITX1P78337 314 aaPredicted RBP21.49■■□□□ 1.03
SDCBP-209ENST00000522243 PDCLQ13371 301 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 TAF5Q15542 800 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 MEA1Q16626 185 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 PTPRNQ16849 979 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 SH3PXD2AQ5TCZ1 1133 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 MFN1Q8IWA4 741 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 CFAP52Q8N1V2 620 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 CARNMT1Q8N4J0 409 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 WDTC1Q8N5D0 677 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 HJURPQ8NCD3 748 aaPredicted RBP21.49■■□□□ 1.03
SDCBP-209ENST00000522243 CEP76Q8TAP6 659 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 SHC3Q92529 594 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 THAP9Q9H5L6 903 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 DNAJC12Q9UKB3 198 aa21.49■■□□□ 1.03
SDCBP-209ENST00000522243 NCOR2Q9Y618 2525 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 GTPBP10A4D1E9 387 aaKnown RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 IRAK2O43187 625 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 SERPINF2P08697 491 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 PNMA6AP0CW24 399 aaPredicted RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 ACADMP11310 421 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 HOXD12P35452 270 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 ATXN3P54252 364 aaPredicted RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 YWHAZP63104 245 aaKnown RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 GFPT1Q06210 699 aaPredicted RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 NNTQ13423 1086 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 MAN2A1Q16706 1144 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 ZC3H12AQ5D1E8 599 aaKnown RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 MS4A13Q5J8X5 152 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 MPP7Q5T2T1 576 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms