RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 VSTM1Q6UX27 236 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 CEP57Q86XR8 500 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 NETO2Q8NC67 525 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 ATXN2LQ8WWM7 1075 aaKnown RBP19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 RNF34Q969K3 372 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 CCT8L2Q96SF2 557 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 EPAS1Q99814 870 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 PRDM12Q9H4Q4 367 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 ACSS3Q9H6R3 686 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 OR12D3Q9UGF7 316 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 RAD54BQ9Y620 910 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 FOXO6A8MYZ6 492 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 AVILO75366 819 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 FAM107AO95990 144 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 CCT5P48643 541 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 GEMIN4P57678 1058 aaKnown RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 EIF4EBP2Q13542 120 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 SEMA5AQ13591 1074 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 MRPL58Q14197 206 aaKnown RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 KLHL38Q2WGJ6 581 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 CAND1Q86VP6 1230 aaKnown RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 NPAS4Q8IUM7 802 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 IGDCC3Q8IVU1 814 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 CCNYQ8ND76 341 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 FBF1Q8TES7 1133 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 P2RY11Q96G91 374 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 C8orf48Q96LL4 319 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 MARCH5Q9NX47 278 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 PCDHB5Q9Y5E4 795 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 NR2E3Q9Y5X4 410 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 PATJQ8NI35 1801 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 PTPRDP23468 1912 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 TMEM120BA0PK00 339 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 OR6C75A6NL08 312 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 TRIM66O15016 1216 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 IRAK2O43187 625 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 ZNF189O75820 626 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 BRAFP15056 766 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 SLC11A1P49279 550 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 MNX1P50219 401 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 ZNF280DQ6N043 979 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 SCD5Q86SK9 330 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 SRRM1Q8IYB3 904 aaKnown RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 CRIPAKQ8N1N5 446 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 SCLYQ96I15 445 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 GPR62Q9BZJ7 368 aa19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 PSMC3IPQ9P2W1 217 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC9-210ENST00000521667 MKI67P46013 3256 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 RASA4BC9J798 803 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 RNF103O00237 685 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 RASA4O43374 803 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 OPHN1O60890 802 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 SPAG6O75602 509 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 FGFR3P22607 806 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 CYP2C18P33260 490 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 FDFT1P37268 417 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 DENND5BQ6ZUT9 1274 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 AGGF1Q8N302 714 aaeCLIP19.04■□□□□ 0.641e-7■■■■■ 56
TRAPPC9-210ENST00000521667 ZNF473Q8WTR7 871 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 MRPL9Q9BYD2 267 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 OSBPL2Q9H1P3 480 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 SMOC2Q9H3U7 446 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 ARHGEF38Q9NXL2 777 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 RSPH14Q9UHP6 348 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 SNX10Q9Y5X0 201 aa19.04■□□□□ 0.64
TRAPPC9-210ENST00000521667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 NCAM2O15394 837 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 LRIG2O94898 1065 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 HSPA8P11142 646 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 MAGEA11P43364 429 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 PGFP49763 221 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 DDR2Q16832 855 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 BRMS1LQ5PSV4 323 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 TRABD2AQ86V40 505 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 TP53INP2Q8IXH6 220 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 NUP93Q8N1F7 819 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 COLGALT1Q8NBJ5 622 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 HIPK3Q9H422 1215 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 NMUR1Q9HB89 426 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 KCNK9Q9NPC2 374 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 CXCL10P02778 98 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 EPHB2P29323 1055 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 EFTUD2Q15029 972 aaKnown RBP eCLIP19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 SDHAF4Q5VUM1 108 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 DIS3LQ8TF46 1054 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 LRRC39Q96DD0 335 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 MRRFQ96E11 262 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 ZNF333Q96JL9 665 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 PGLYRP2Q96PD5 576 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 TMEM175Q9BSA9 504 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 DHRS4Q9BTZ2 278 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 HCSTQ9UBK5 93 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 SCML2Q9UQR0 700 aa19.03■□□□□ 0.64
TRAPPC9-210ENST00000521667 A0A1W2PQH9 124 aa19.02■□□□□ 0.64
TRAPPC9-210ENST00000521667 MAGEA3P43357 314 aa19.02■□□□□ 0.64
TRAPPC9-210ENST00000521667 GPR15P49685 360 aa19.02■□□□□ 0.64
TRAPPC9-210ENST00000521667 CCL23P55773 120 aa19.02■□□□□ 0.64
TRAPPC9-210ENST00000521667 WASHC5Q12768 1159 aa19.02■□□□□ 0.64
TRAPPC9-210ENST00000521667 FUT10Q6P4F1 479 aa19.02■□□□□ 0.64
TRAPPC9-210ENST00000521667 ZNF534Q76KX8 674 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms