RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 PGPEP1LA6NFU8 196 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 K7ENM7 598 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 GFPT2O94808 682 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 TMEM63AO94886 807 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 DLDP09622 509 aaKnown RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 TMIGD3P0DMS9 266 aaPredicted RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 ZFXP17010 805 aaPredicted RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 CTGFP29279 349 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 FOXL2P58012 376 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 TXNL4AP83876 142 aaKnown RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 FZD5Q13467 585 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 BMPR2Q13873 1038 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 PTPRRQ15256 657 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 NFIL3Q16649 462 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 SPATA1Q5VX52 437 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 WDR93Q6P2C0 686 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 DENND1BQ6P3S1 775 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 ARHGEF19Q8IW93 802 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 CHST13Q8NET6 341 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 OR52L2PQ8NGH6 319 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 ADAMTS15Q8TE58 950 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 CLEC4CQ8WTT0 213 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 GLMPQ8WWB7 406 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 ASB10Q8WXI3 467 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 RFKQ969G6 155 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 PBKQ96KB5 322 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 FUZQ9BT04 418 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 CINPQ9BW66 212 aaPredicted RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 PHF7Q9BWX1 381 aaPredicted RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 STN1Q9H668 368 aaKnown RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 IL21RQ9HBE5 538 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 PDE11AQ9HCR9 933 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 VPS4AQ9UN37 437 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 LAS1LQ9Y4W2 734 aaKnown RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 PRG4Q92954 1404 aaPredicted RBP8.18□□□□□ -1.1
LSM1-202ENST00000520286 GRIN2AQ12879 1464 aa8.18□□□□□ -1.1
LSM1-202ENST00000520286 WDR27A2RRH5 827 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 ZBED4O75132 1171 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 GUCY1B2O75343 617 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 WEE2P0C1S8 567 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 TNNT1P13805 278 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 PAFAH1B1P43034 410 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 CCR9P51686 369 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 NAP1L1P55209 391 aaKnown RBP8.17□□□□□ -1.1
LSM1-202ENST00000520286 TBL3Q12788 808 aaKnown RBP8.17□□□□□ -1.1
LSM1-202ENST00000520286 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
LSM1-202ENST00000520286 Q6ZWC4 215 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 PDILTQ8N807 584 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 EXTL1Q92935 676 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 BDH2Q9BUT1 245 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 CLPBQ9H078 707 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 TAOK3Q9H2K8 898 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 SNX15Q9NRS6 342 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 AMFRQ9UKV5 643 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 SUFUQ9UMX1 484 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 FZD1Q9UP38 647 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 CUX1P39880 1505 aa8.17□□□□□ -1.1
LSM1-202ENST00000520286 CENPVL1A0A0U1RR11 272 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 FSD2A1L4K1 749 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 PLSCR1O15162 318 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 PEX1O43933 1283 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 DHX16O60231 1041 aaKnown RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 NR2F6P10588 404 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 CXCR5P32302 372 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 GGT5P36269 586 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 TXKP42681 527 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 CCDC15Q0P6D6 951 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 THOC5Q13769 683 aaKnown RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 R3HDM1Q15032 1099 aaKnown RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 DENND2CQ68D51 928 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 PARS2Q7L3T8 475 aaKnown RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 RP9Q8TA86 221 aaKnown RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 TREX2Q9BQ50 279 aaPredicted RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 CDCP1Q9H5V8 836 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 ANKFY1Q9P2R3 1169 aa8.16□□□□□ -1.1
LSM1-202ENST00000520286 COPG1Q9Y678 874 aaKnown RBP8.16□□□□□ -1.1
LSM1-202ENST00000520286 GRM8O00222 908 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 MPPED1O15442 326 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 FIBPO43427 364 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 EGR2P11161 476 aaPredicted RBP8.15□□□□□ -1.1
LSM1-202ENST00000520286 MATN1P21941 496 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 TGM1P22735 817 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 POLD2P49005 469 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 DIO1P49895 249 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 CLNS1AP54105 237 aaKnown RBP8.15□□□□□ -1.1
LSM1-202ENST00000520286 IRX6P78412 446 aaPredicted RBP8.15□□□□□ -1.1
LSM1-202ENST00000520286 TXNRD1Q16881 649 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 USP39Q53GS9 565 aaKnown RBP8.15□□□□□ -1.1
LSM1-202ENST00000520286 FAM69AQ5T7M9 428 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 H1FNTQ75WM6 255 aaPredicted RBP8.15□□□□□ -1.1
LSM1-202ENST00000520286 LSM14AQ8ND56 463 aaKnown RBP8.15□□□□□ -1.1
LSM1-202ENST00000520286 MASTLQ96GX5 879 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 Q96MF0 132 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 ELOVL1Q9BW60 279 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 SYNPO2LQ9H987 977 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 USP29Q9HBJ7 922 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 ARHGEF3Q9NR81 526 aa8.15□□□□□ -1.1
LSM1-202ENST00000520286 KRT84Q9NSB2 600 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms