RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 NR2E3Q9Y5X4 410 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 MYO18AQ92614 2054 aaKnown RBP17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 A0A087WZ62 844 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 A6NJR5 290 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 C22orf31O95567 290 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 STAU1O95793 577 aaKnown RBP17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 SLC26A2P50443 739 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 COPAP53621 1224 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 ATXN1P54253 815 aaKnown RBP17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 RALGPS1Q5JS13 557 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 ATG14Q6ZNE5 492 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 APOBEC3FQ8IUX4 373 aaKnown RBP17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 SLC35F5Q8WV83 523 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 ATP2A3Q93084 1043 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 TUBGCP5Q96RT8 1024 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 FDXACB1Q9BRP7 624 aaPredicted RBP17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 SMARCAD1Q9H4L7 1026 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 FAM49BQ9NUQ9 324 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 MTMR10Q9NXD2 777 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 DTLQ9NZJ0 730 aa17.32■□□□□ 0.36
TSPAN17-209ENST00000515708 F5H423 210 aaPredicted RBP17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 CCNT2O60583 730 aaKnown RBP17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 SERPINE1P05121 402 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 MLNP12872 115 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 DHDDSQ86SQ9 333 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 ACOT1Q86TX2 421 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 PYDC1Q8WXC3 89 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 CDKL2Q92772 493 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 CSPG4P5Q96PW8 444 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 SORT1Q99523 831 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 AP4E1Q9UPM8 1137 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 PSAT1Q9Y617 370 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 SETSIPP0DME0 302 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 ARF4P18085 180 aaPredicted RBP17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 PTPN9P43378 593 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 IDH3AP50213 366 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 IGBP1P78318 339 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 C10orf107Q8IVU9 208 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 HTR3CQ8WXA8 447 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 COPS5Q92905 334 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 CLMNQ96JQ2 1002 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 RNPEPQ9H4A4 650 aa17.31■□□□□ 0.36
TSPAN17-209ENST00000515708 A0A0A0MRY4 1105 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 SNUPNO95149 360 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PRKCGP05129 697 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PGK2P07205 417 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 VAV1P15498 845 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 ARRB2P32121 409 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 POLE2P56282 527 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 HNRNPDQ14103 355 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 RBBP5Q15291 538 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PPP4R1Q8TF05 950 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 SPATA13Q96N96 652 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 KCTD15Q96SI1 283 aaPredicted RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 MRPL45Q9BRJ2 306 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 EBF3Q9H4W6 596 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PNPOQ9NVS9 261 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PIH1D1Q9NWS0 290 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 DNAJC28Q9NX36 388 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 GTF2IRD1Q9UHL9 959 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 MFHAS1Q9Y4C4 1052 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PROCP04070 461 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 ITGA2BP08514 1039 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 GRK2P25098 689 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 FDFT1P37268 417 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 EPHB1P54762 984 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 BTKQ06187 659 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 POU5F1BQ06416 359 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 PGM2L1Q6PCE3 622 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 RSPH3Q86UC2 560 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 ZDHHC17Q8IUH5 632 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 OR6Y1Q8NGX8 325 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■■□□□ 12.2
TSPAN17-209ENST00000515708 TFB1MQ8WVM0 346 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 ARNTL2Q8WYA1 636 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 CENPIQ92674 756 aaPredicted RBP17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
TSPAN17-209ENST00000515708 CITO14578 2027 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 RNASEH1O60930 286 aaKnown RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 MYL4P12829 197 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 ALOX15P16050 662 aaPredicted RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 SESN2P58004 480 aaPredicted RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 ASPHQ12797 758 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 CCNIQ14094 377 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 LRRC8BQ6P9F7 803 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 FBXO16Q8IX29 292 aaPredicted RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 ACTRT2Q8TDY3 377 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 CLEC4CQ8WTT0 213 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 FAM210AQ96ND0 272 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 OLFM3Q96PB7 478 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 LGMNQ99538 433 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 FAM96AQ9H5X1 160 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 ZDHHC7Q9NXF8 308 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms