RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 PHTF2Q8N3S3 785 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 TRIM7Q9C029 511 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 EPHX3Q9H6B9 360 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 RETREG1Q9H6L5 497 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 ANLNQ9NQW6 1124 aa16.1■□□□□ 0.17
POLR2J3-218ENST00000513506 A0A0A6YYK5 440 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 KANSL1LA0AUZ9 987 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 FAM170AA1A519 330 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 SOWAHDA6NJG2 315 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 DRGXA6NNA5 263 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 CCP110O43303 1012 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 PAGE1O75459 146 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 SLC6A4P31645 630 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 MAGEA1P43355 309 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 ATP11AP98196 1134 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 NME3Q13232 169 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 FZD5Q13467 585 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 TXNDC11Q6PKC3 985 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 RHOT2Q8IXI1 618 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 SIX5Q8N196 739 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 RFFLQ8WZ73 363 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 CLDN23Q96B33 292 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 CALR3Q96L12 384 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 NUP85Q9BW27 656 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 TKTL2Q9H0I9 626 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 LUC7LQ9NQ29 371 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 C11orf16Q9NQ32 467 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 FBXL21Q9UKT6 434 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 SLC27A6Q9Y2P4 619 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 MRPS17Q9Y2R5 130 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 REXO2Q9Y3B8 237 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
POLR2J3-218ENST00000513506 SCAMP3O14828 347 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 PJA2O43164 708 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 CISD3P0C7P0 127 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 MAN1A1P33908 653 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 ARHGAP25P42331 645 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 CLCN5P51795 746 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 ATXN1P54253 815 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 SPA17Q15506 151 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 RAB6CQ53S08 254 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 MANEALQ5VSG8 457 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 TPRG1Q6ZUI0 275 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 KIAA0907Q7Z7F0 614 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 LRRC8AQ8IWT6 810 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 TMA16Q96EY4 203 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 RAB6CQ9H0N0 254 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 MYO1AQ9UBC5 1043 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 HS3ST4Q9Y661 456 aa16.08■□□□□ 0.16
POLR2J3-218ENST00000513506 ZDBF2Q9HCK1 2354 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 MYO1FO00160 1098 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 ARHGAP6O43182 974 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 LRCH4O75427 683 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 CYBBP04839 570 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 CHRM1P11229 460 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 TYRP14679 529 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 DESP17661 470 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 TACR2P21452 398 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 PSMA2P25787 234 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 HOXD9P28356 352 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 SOX9P48436 509 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 SEMA3BQ13214 749 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 AUHQ13825 339 aaKnown RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 CCINQ13939 588 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 ARL13BQ3SXY8 428 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 PREPLQ4J6C6 727 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 CYP4V2Q6ZWL3 525 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 FAM131BQ86XD5 332 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 SYNPOQ8N3V7 929 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 SLC35G2Q8TBE7 412 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 ZNF564Q8TBZ8 553 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 FAM3CQ92520 227 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 RNF34Q969K3 372 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 LMLNQ96KR4 655 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 PRICKLE1Q96MT3 831 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 BBS2Q9BXC9 721 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 LTB4R2Q9NPC1 389 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 PPARGC1AQ9UBK2 798 aaKnown RBP16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 CA14Q9ULX7 337 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 COL4A3Q01955 1670 aa16.07■□□□□ 0.16
POLR2J3-218ENST00000513506 GOLGA6L7A0A1B0GV03 622 aa16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 TULP3O75386 442 aa16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 RNF8O76064 485 aa16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 PROSCO94903 275 aa16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 DRD1P21728 446 aa16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 HTR7P34969 479 aa16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
POLR2J3-218ENST00000513506 GALK1P51570 392 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms