RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 ABCB8Q9NUT2 735 aa13.96□□□□□ -0.17
POLR2J3-217ENST00000513438 EIF2B4Q9UI10 523 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-217ENST00000513438 STOML2Q9UJZ1 356 aa13.96□□□□□ -0.17
POLR2J3-217ENST00000513438 PLA2G4CQ9UP65 541 aa13.96□□□□□ -0.17
POLR2J3-217ENST00000513438 FAM208BQ5VWN6 2430 aa13.96□□□□□ -0.17
POLR2J3-217ENST00000513438 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 FAM221BA6H8Z2 402 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 PIK3R2O00459 728 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 BCAT2O15382 392 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 MSI1O43347 362 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 GABBR2O75899 941 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 SMC2O95347 1197 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 FMO5P49326 533 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 ZNF445P59923 1031 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 CAMK2GQ13555 558 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 ACAP1Q15027 740 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 FNDC3BQ53EP0 1204 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 TMEM270Q6UE05 265 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 LCLAT1Q6UWP7 414 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 KIAA0907Q7Z7F0 614 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 NAXDQ8IW45 347 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 SCML4Q8N228 414 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 ZNF366Q8N895 744 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 WFIKKN2Q8TEU8 576 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 SLC35F5Q8WV83 523 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 TMEM245Q9H330 911 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 METTL14Q9HCE5 456 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 PCDHB4Q9Y5E5 795 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
POLR2J3-217ENST00000513438 BAHCC1Q9P281 2608 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 LATS1O95835 1130 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 PAEPP09466 180 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 PABPC1P11940 636 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 ACSL1P33121 698 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 SGSHP51688 502 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 BNC1Q01954 994 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 CNGA2Q16280 664 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 RFWD3Q6PCD5 774 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 RAB44Q7Z6P3 723 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 PNPLA1Q8N8W4 532 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 C1orf216Q8TAB5 229 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 KAT5Q92993 513 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 ZSWIM1Q9BR11 485 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 LHX5Q9H2C1 402 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 GAREM1Q9H706 876 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 IL21RQ9HBE5 538 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 NBEAQ8NFP9 2946 aa13.94□□□□□ -0.18
POLR2J3-217ENST00000513438 KNL1Q8NG31 2342 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 ACSL4O60488 711 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 TBL1XO60907 577 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 CALCAP01258 141 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 FTH1P19P0C7X4 201 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 MATKP42679 507 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 CSNK1EP49674 416 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 PTPRNQ16849 979 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 MSANTD2Q6P1R3 559 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 AHI1Q8N157 1196 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 WFDC5Q8TCV5 224 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 SETD7Q8WTS6 366 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 CLEC4CQ8WTT0 213 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 IRGQQ8WZA9 623 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 GTPBP4Q9BZE4 634 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 C6orf106Q9H6K1 298 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 PRSS16Q9NQE7 514 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 STIM2Q9P246 746 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 SUN2Q9UH99 717 aa13.93□□□□□ -0.18
POLR2J3-217ENST00000513438 A0A1B0GVT2 93 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 M0QYV0 167 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 PSMA7O14818 248 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 PMM2O15305 246 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 CBFA2T3O75081 653 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 IGLV3-27P01718 113 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 LTFP02788 710 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 DLDP09622 509 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 POLR2EP19388 210 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 SLC6A4P31645 630 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 CD70P32970 193 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 SLC11A2P49281 568 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 TBX4P57082 545 aa13.92□□□□□ -0.18
POLR2J3-217ENST00000513438 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms